Select Publications
Book Chapters
2015, 'Chapter 67 Campylobacter', in Molecular Medical Microbiology, Elsevier, pp. 1187 - 1236, http://dx.doi.org/10.1016/b978-0-12-397169-2.00067-6
,2014, 'The Family Helicobacteraceae', in Rosenberg E; DeLong EF; Lory S; Stackebrandt E; Thompson F (ed.), The Prokaryotes, 4th Edition, Volume 10 Deltaproteobacteria and Epsilonproteobacteria, Springer-Verlag, Berlin Heidelberg
,2014, 'Campylobacter', in Molecular Medical Microbiology, pp. 1187 - 1236, http://dx.doi.org/10.1016/B978-0-12-397169-2.00067-6
,2010, 'Extragastric manifestations of Helicobacter pylori infection', in Sutton P; Mitchell H (ed.), Helicobacter pylori in the 21st Century, CABI, Cambridge, MA, pp. 69 - 93, http://dx.doi.org/10.1079/9781845935948.0069
,Journal articles
2024, 'Profiling the colonic mucosal response to fecal microbiota transplantation identifies a role for GBP5 in colitis in humans and mice', Nature Communications, 15, http://dx.doi.org/10.1038/s41467-024-46983-5
,2024, 'Refining microbial community metabolic models derived from metagenomics using reference-based taxonomic profiling', mSystems, 9, pp. e0074624, http://dx.doi.org/10.1128/msystems.00746-24
,2024, 'Key metabolomic alterations are associated with ulcerative colitis disease state and activity: A validation analysis', Gut, 73, pp. 1392 - 1393, http://dx.doi.org/10.1136/gutjnl-2023-330196
,2024, 'Ku70 senses cytosolic DNA and assembles a tumor-suppressive signalosome', Science Advances, 10, http://dx.doi.org/10.1126/sciadv.adh3409
,2024, 'P1205 Features of the gut microbiota that associate with clinical outcomes of fecal microbiota transplantation in Ulcerative Colitis: a systematic review and meta-analysis', Journal of Crohn's and Colitis, 18, pp. i2145 - i2146, http://dx.doi.org/10.1093/ecco-jcc/jjad212.1335
,2024, 'P1233 Serum insulin is associated with c-reactive protein and gut microbial diversity in inflammatory bowel disease', Journal of Crohn's and Colitis, 18, pp. i2183 - i2183, http://dx.doi.org/10.1093/ecco-jcc/jjad212.1363
,2024, 'Horizontal gene transfer and endogenous retroviruses as mechanisms for molecular mimicry', The Lancet Microbe, 5, pp. e4 - e5, http://dx.doi.org/10.1016/S2666-5247(23)00316-6
,2024, 'The Effect of Creatine Supplementation on Resistance Training-Based Changes to Body Composition: A Systematic Review and Meta-analysis', Journal of Strength and Conditioning Research, http://dx.doi.org/10.1519/JSC.0000000000004862
,2023, 'The Role of the Gastrointestinal Microbiome in Liver Disease', Pathogens, 12, http://dx.doi.org/10.3390/pathogens12091087
,2023, 'The effect of exercise intensity on the inflammatory profile of cancer survivors: A randomised crossover study', European Journal of Clinical Investigation, 53, pp. e13984, http://dx.doi.org/10.1111/eci.13984
,2023, 'Clostridium perfringens virulence factors are nonredundant activators of the NLRP3 inflammasome', EMBO Reports, 24, http://dx.doi.org/10.15252/embr.202254600
,2023, 'Obesogenic Diet Cycling Produces Graded Effects on Cognition and Microbiota Composition in Rats', Molecular Nutrition and Food Research, 67, http://dx.doi.org/10.1002/mnfr.202200809
,2023, 'Immunity against Moraxella catarrhalis requires guanylate-binding proteins and caspase-11-NLRP3 inflammasomes', EMBO Journal, 42, http://dx.doi.org/10.15252/embj.2022112558
,2023, 'Irradiation-Induced Dysbiosis: The Compounding Effect ofHigh-Fat Diet on Metabolic and Immune Functions in Mice', International Journal of Molecular Sciences, 24, pp. 5631 - 5631, http://dx.doi.org/10.3390/ijms24065631
,2023, 'The microbiome in HLA-B27-associated disease: implications for acute anterior uveitis and recommendations for future studies', Trends in Microbiology, 31, pp. 142 - 158, http://dx.doi.org/10.1016/j.tim.2022.08.008
,2023, 'Microbial determinants of effective donors in faecal microbiota transplantation for UC', Gut, 72, pp. 90 - 100, http://dx.doi.org/10.1136/gutjnl-2022-327742
,2023, 'The Benefits of Switching to a Healthy Diet on Metabolic, Cognitive, and Gut Microbiome Parameters Are Preserved in Adult Rat Offspring of Mothers Fed a High-Fat, High-Sugar Diet', Molecular Nutrition and Food Research, 67, http://dx.doi.org/10.1002/mnfr.202200318
,2022, 'Identification of clinical and ecological determinants of strain engraftment after fecal microbiota transplantation using metagenomics', Cell Reports Medicine, 3, http://dx.doi.org/10.1016/j.xcrm.2022.100711
,2022, 'The influence of maternal unhealthy diet on maturation of offspring gut microbiota in rat', Animal Microbiome, 4, http://dx.doi.org/10.1186/s42523-022-00185-w
,2022, 'Clostridium septicum α-toxin activates the NLRP3 inflammasome by engaging GPI-anchored proteins', Science Immunology, 7, http://dx.doi.org/10.1126/sciimmunol.abm1803
,2022, 'Differences in the Active Endometrial Microbiota across Body Weight and Cancer in Humans and Mice', Cancers, 14, pp. 2141, http://dx.doi.org/10.3390/cancers14092141
,2022, 'Oral faecal microbiota transplantation in ulcerative colitis – Authors' reply', The Lancet Gastroenterology and Hepatology, 7, pp. 286 - 287, http://dx.doi.org/10.1016/S2468-1253(22)00045-0
,2022, 'Lyophilised oral faecal microbiota transplantation for ulcerative colitis (LOTUS): a randomised, double-blind, placebo-controlled trial', The Lancet Gastroenterology and Hepatology, 7, pp. 141 - 151, http://dx.doi.org/10.1016/S2468-1253(21)00400-3
,2022, 'Changes to the upper gastrointestinal microbiotas of children with reflux oesophagitis and oesophageal metaplasia', Microbial Genomics, 8, http://dx.doi.org/10.1099/mgen.0.000870
,2022, 'The interplay between PCOS pathology and diet on gut microbiota in a mouse model', Gut Microbes, 14, http://dx.doi.org/10.1080/19490976.2022.2085961
,2022, 'The role of ATG16L2 in autophagy and disease', Autophagy, 18, pp. 2537 - 2546, http://dx.doi.org/10.1080/15548627.2022.2042783
,2021, 'Multi-omics of the esophageal microenvironment identifies signatures associated with progression of Barrett’s esophagus', Genome Medicine, 13, pp. 133, http://dx.doi.org/10.1186/s13073-021-00951-6
,2021, 'Response to faecal microbiota transplantation in ulcerative colitis is not sustained long term following induction therapy', Gut, 70, pp. 2210 - 2211, http://dx.doi.org/10.1136/gutjnl-2020-323581
,2021, 'Response to faecal microbiota transplantation in ulcerative colitis is not sustained long term following induction therapy', GUT, 70, pp. 2210 - 2210, http://dx.doi.org/10.1136/gutjnl-2020-323581
,2021, 'Intraspecies strain exclusion, antibiotic pretreatment, and donor selection control microbiota engraftment after fecal transplantation', , http://dx.doi.org/10.1101/2021.08.18.21262200
,2021, 'Nuclear Leukocyte Immunoglobulin-like Receptor A3 Is Monomeric and Is Involved in Multiple Layers of Regulated Gene Expression and Translation', Journal of Proteome Research, 20, pp. 3078 - 3089, http://dx.doi.org/10.1021/acs.jproteome.0c00946
,2021, 'Lyophilised orally administered faecal microbiota transplantation for Active Ulcerative Colitis (LOTUS study)', JOURNAL OF CROHNS & COLITIS, 15, pp. S029 - S029, http://dx.doi.org/10.1093/ecco-jcc/jjab075.029
,2021, 'Long-term bacterial and fungal dynamics following oral lyophilized fecal microbiota transplantation in clostridioides difficile infection', mSystems, 6, http://dx.doi.org/10.1128/MSYSTEMS.00905-20
,2021, '680 LYOPHILIZED ORALLY ADMINISTERED FECAL MICROBIOTA TRANSPLANTATION IN THE MANAGEMENT OF ULCERATIVE COLITIS (LOTUS STUDY) – RESULTS FROM THE INDUCTION PHASE OF A RANDOMIZED CONTROLLED TRIAL', Gastroenterology, 160, pp. S - 135, http://dx.doi.org/10.1016/s0016-5085(21)01074-x
,2021, 'Ageing impairs the airway epithelium defence response to SARS-CoV-2', , http://dx.doi.org/10.1101/2021.04.05.437453
,2020, 'Bacillus cereus non-haemolytic enterotoxin activates the NLRP3 inflammasome', Nature Communications, 11, http://dx.doi.org/10.1038/s41467-020-14534-3
,2020, 'Intermittent cafeteria diet identifies fecal microbiome changes as a predictor of spatial recognition memory impairment in female rats', Translational Psychiatry, 10, http://dx.doi.org/10.1038/s41398-020-0734-9
,2020, 'Minocycline-induced microbiome alterations predict cafeteria diet-induced spatial recognition memory impairments in rats', Translational Psychiatry, 10, http://dx.doi.org/10.1038/s41398-020-0774-1
,2020, 'Presence of gastric pepsinogen in the trachea is associated with altered inflammation and microbial composition', Infection and Immunity, 88, http://dx.doi.org/10.1128/IAI.00455-20
,2020, 'Spp24 is associated with endocytic signalling, lipid metabolism, and discrimination of tissue integrity for ‘leaky-gut’ in inflammatory bowel disease', Scientific Reports, 10, http://dx.doi.org/10.1038/s41598-020-69746-w
,2020, 'Defined microbiota transplant restores Th17/RORγt+ regulatory T cell balance in mice colonized with inflammatory bowel disease microbiotas', Proceedings of the National Academy of Sciences of the United States of America, 117, pp. 21536 - 21545, http://dx.doi.org/10.1073/pnas.1922189117
,2020, 'Treadmill exercise has minimal impact on obesogenic diet-related gut microbiome changes but alters adipose and hypothalamic gene expression in rats', Nutrition and Metabolism, 17, http://dx.doi.org/10.1186/s12986-020-00492-6
,2020, 'Fecal transplants as a microbiome-based therapeutic', Current Opinion in Microbiology, 56, pp. 16 - 23, http://dx.doi.org/10.1016/j.mib.2020.05.008
,2020, 'Sutterella Species, IgA-degrading Bacteria in Ulcerative Colitis', Trends in Microbiology, 28, pp. 519 - 522, http://dx.doi.org/10.1016/j.tim.2020.02.018
,2020, 'Fungal Trans-kingdom Dynamics Linked to Responsiveness to Fecal Microbiota Transplantation (FMT) Therapy in Ulcerative Colitis', Cell Host and Microbe, 27, pp. 823 - 829.e3, http://dx.doi.org/10.1016/j.chom.2020.03.006
,2020, 'MON-022 Dissecting the Interplay Between Diet and PCOS Pathology on Gut Microbiota in a PCOS Mouse Model', Journal of the Endocrine Society, 4, http://dx.doi.org/10.1210/jendso/bvaa046.568
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