Select Publications

Book Chapters

Johnston EL; Dafforn KA; Clark GF; Rius M; Floerl O, 2017, 'How Anthropogenic Activities Affect the Establishment and Spread of Non-Indigenous Species Post-Arrival', in Oceanography and Marine Biology, CRC Press, pp. 389 - 419, http://dx.doi.org/10.1201/b21944-6

Birrer SC; Dafforn KA; Johnston EL, 2017, 'Microbial community responses to contaminants and the use of molecular techniques', in Microbial Ecotoxicology, Springer, pp. 165 - 183, http://dx.doi.org/10.1007/978-3-319-61795-4_8

Johnston EL; Dafforn KA; Clark GF; Rius M; Floerl O, 2017, 'How anthropogenic activities affect the establishment and spread of non-indigenous species post-arrival', in Oceanography and Marine Biology: An Annual Review, pp. 389 - 419, http://dx.doi.org/10.1201/b21944

Dafforn KA; Baird DJ; Chariton AA; Sun MY; Brown MV; Simpson SL; Kelaher BP; Johnston EL, 2014, 'Chapter One Faster, Higher and Stronger? The Pros and Cons of Molecular Faunal Data for Assessing Ecosystem Condition', in Big Data in Ecology, pp. 1 - 40, http://dx.doi.org/10.1016/b978-0-08-099970-8.00003-8

Journal articles

Lowe EC; Steven R; Morris RL; Parris KM; Aguiar AC; Webb CE; Bugnot AB; Dafforn KA; Connolly RM; Mayer Pinto M, 2022, 'Supporting urban ecosystem services across terrestrial, marine and freshwater realms', Science of the Total Environment, vol. 817, pp. 152689, http://dx.doi.org/10.1016/j.scitotenv.2021.152689

Ruprecht JE; King IP; Dafforn KA; Mitrovic SM; Harrison AJ; Birrer SC; Crane SL; Glamore WC, 2022, 'Implications of bacterial mineralisation in aquatic ecosystem response models', Water Research, vol. 209, pp. 117888, http://dx.doi.org/10.1016/j.watres.2021.117888

Esquivel-Muelbert JR; Lanham BS; Martinez-Baena F; Dafforn KA; Gribben PE; Bishop MJ, 2022, 'Spatial variation in the biotic and abiotic filters of oyster recruitment: Implications for restoration', JOURNAL OF APPLIED ECOLOGY, http://dx.doi.org/10.1111/1365-2664.14107

Floerl O; Atalah J; Bugnot AB; Chandler M; Dafforn KA; Floerl L; Zaiko A; Major R, 2021, 'A global model to forecast coastal hardening and mitigate associated socioecological risks', Nature Sustainability, vol. 4, pp. 1060 - 1067, http://dx.doi.org/10.1038/s41893-021-00780-w

Birrer SC; Wemheuer F; Dafforn KA; Gribben PE; Steinberg PD; Simpson SL; Potts J; Scanes P; Doblin MA; Johnston EL, 2021, 'Legacy Metal Contaminants and Excess Nutrients in Low Flow Estuarine Embayments Alter Composition and Function of Benthic Bacterial Communities', Frontiers in Microbiology, vol. 12, http://dx.doi.org/10.3389/fmicb.2021.661177

Steinberg RK; Johnston EL; Bednarek T; Dafforn KA; Ainsworth TD, 2021, 'Its What’s on the Inside That Counts: An Effective, Efficient, and Streamlined Method for Quantification of Octocoral Symbiodiniaceae and Chlorophyll', Frontiers in Marine Science, vol. 8, http://dx.doi.org/10.3389/fmars.2021.710730

Ruprecht JE; Birrer SC; Dafforn KA; Mitrovic SM; Crane SL; Johnston EL; Wemheuer F; Navarro A; Harrison AJ; Turner IL; Glamore WC, 2021, 'Wastewater effluents cause microbial community shifts and change trophic status', Water Research, vol. 200, pp. 117206, http://dx.doi.org/10.1016/j.watres.2021.117206

Vadillo Gonzalez S; Johnston EL; Dafforn KA; O'Connor WA; Gribben PE, 2021, 'Body size affects lethal and sublethal responses to organic enrichment: Evidence of associational susceptibility for an infaunal bivalve', Marine Environmental Research, vol. 169, pp. 105391 - 105391, http://dx.doi.org/10.1016/j.marenvres.2021.105391

Bracewell SA; Dafforn KA; Lavender JT; Clark GF; Johnston EL, 2021, 'Latitudinal variation in the diversity–disturbance relationship demonstrates the context dependence of disturbance impacts', Global Ecology and Biogeography, vol. 30, pp. 1389 - 1402, http://dx.doi.org/10.1111/geb.13305

Shackleton ME; Dafforn KA; Murphy NP; Greenfield P; Cassidy M; Besley CH, 2021, 'How does molecular taxonomy for deriving river health indices correlate with traditional morphological taxonomy?', Ecological Indicators, vol. 125, http://dx.doi.org/10.1016/j.ecolind.2021.107537

Bergstrom DM; Wienecke BC; van den Hoff J; Hughes L; Lindenmayer DB; Ainsworth TD; Baker CM; Bland L; Bowman DMJS; Brooks ST; Canadell JG; Constable AJ; Dafforn KA; Depledge MH; Dickson CR; Duke NC; Helmstedt KJ; Holz A; Johnson CR; McGeoch MA; Melbourne-Thomas J; Morgain R; Nicholson E; Prober SM; Raymond B; Ritchie EG; Robinson SA; Ruthrof KX; Setterfield SA; Sgrò CM; Stark JS; Travers T; Trebilco R; Ward DFL; Wardle GM; Williams KJ; Zylstra PJ; Shaw JD, 2021, 'Combating ecosystem collapse from the tropics to the Antarctic', Global Change Biology, vol. 27, pp. 1692 - 1703, http://dx.doi.org/10.1111/gcb.15539

Threlfall CG; Marzinelli EM; Ossola A; Bugnot AB; Bishop MJ; Lowe EC; Imberger SJ; Myers S; Steinberg PD; Dafforn KA, 2021, 'Toward cross-realm management of coastal urban ecosystems', Frontiers in Ecology and the Environment, vol. 19, pp. 225 - 233, http://dx.doi.org/10.1002/fee.2323

Vozzo ML; Mayer-Pinto M; Bishop MJ; Cumbo VR; Bugnot AB; Dafforn KA; Johnston EL; Steinberg PD; Strain EMA, 2021, 'Making seawalls multifunctional: The positive effects of seeded bivalves and habitat structure on species diversity and filtration rates', Marine Environmental Research, vol. 165, http://dx.doi.org/10.1016/j.marenvres.2020.105243

Critchley LP; Bugnot AB; Dafforn KA; Marzinelli EM; Bishop MJ, 2021, 'Comparison of wrack dynamics between mangrove forests with and without seawalls', Science of the Total Environment, vol. 751, http://dx.doi.org/10.1016/j.scitotenv.2020.141371

Airoldi L; Beck MW; Firth LB; Bugnot AB; Steinberg PD; Dafforn KA, 2021, 'Emerging Solutions to Return Nature to the Urban Ocean', Annual Review of Marine Science, vol. 13, pp. 445 - 477, http://dx.doi.org/10.1146/annurev-marine-032020-020015

Bugnot AB; Mayer-Pinto M; Airoldi L; Heery EC; Johnston EL; Critchley LP; Strain EMA; Morris RL; Loke LHL; Bishop MJ; Sheehan EV; Coleman RA; Dafforn KA, 2021, 'Current and projected global extent of marine built structures', Nature Sustainability, vol. 4, pp. 33 - 41, http://dx.doi.org/10.1038/s41893-020-00595-1

MacIntosh A; Dafforn K; Penrose B; Chariton A; Cresswell T, 2021, 'Ecotoxicological effects of decommissioning offshore petroleum infrastructure: A systematic review', Critical Reviews in Environmental Science and Technology, http://dx.doi.org/10.1080/10643389.2021.1917949

Ruprecht JE; Glamore WC; Dafforn KA; Wemheuer F; Crane SL; van Dorst J; Johnston EL; Mitrovic SM; Turner IL; Ferrari BC; Birrer SC, 2020, 'A novel real-world ecotoxicological dataset of pelagic microbial community responses to wastewater', Scientific Data, vol. 7, pp. 158, http://dx.doi.org/10.1038/s41597-020-0496-5

Mayer-Pinto M; Dafforn KA; Fobert E, 2020, 'Knowledge exchange to improve research and management of the impacts of artificial light at night', Austral Ecology, vol. 45, pp. 1059 - 1061, http://dx.doi.org/10.1111/aec.12948

Steinberg RK; Dafforn KA; Ainsworth T; Johnston EL, 2020, 'Know Thy Anemone: A Review of Threats to Octocorals and Anemones and Opportunities for Their Restoration', Frontiers in Marine Science, vol. 7, http://dx.doi.org/10.3389/fmars.2020.00590

Borja A; Andersen JH; Arvanitidis CD; Basset A; Buhl-Mortensen L; Carvalho S; Dafforn KA; Devlin MJ; Escobar-Briones EG; Grenz C; Harder T; Katsanevakis S; Liu D; Metaxas A; Morán XAG; Newton A; Piroddi C; Pochon X; Queirós AM; Snelgrove PVR; Solidoro C; St. John MA; Teixeira H, 2020, 'Past and Future Grand Challenges in Marine Ecosystem Ecology', Frontiers in Marine Science, vol. 7, http://dx.doi.org/10.3389/fmars.2020.00362

Schaefer N; Mayer-Pinto M; Griffin KJ; Johnston EL; Glamore W; Dafforn KA, 2020, 'Predicting the impact of sea-level rise on intertidal rocky shores with remote sensing', Journal of Environmental Management, vol. 261, http://dx.doi.org/10.1016/j.jenvman.2020.110203

Lee AL; Capa M; Dafforn KA; Hutchings PA; Murray A, 2020, 'New records of non-indigenous Branchiomma and Parasabella species (Sabellidae: Annelida) in South Australia highlight the continuing challenges for sabellid taxonomy', Journal of Natural History, vol. 54, pp. 2647 - 2673, http://dx.doi.org/10.1080/00222933.2020.1862334

Zavoleas Y; Haeusler M; Dunn K; Bishop M; Dafforn K; Schaefer N; Sedano F; Yu DK, 2020, 'Designing Bio-Shelters: Improving Water Quality and Biodiversity in the Bays Precinct through Dynamic Data-Driven Approaches', Journal of Digital Landscape Architecture, vol. 5-2020, pp. 521 - 532, http://dx.doi.org/10.14627/537690053

Filippini G; Bugnot AB; Johnston EL; Ruszczyk J; Potts J; Scanes P; Ferguson A; Ostrowski M; Varkey D; Dafforn KA, 2019, 'Sediment bacterial communities associated with environmental factors in Intermittently Closed and Open Lakes and Lagoons (ICOLLs)', Science of the Total Environment, vol. 693, http://dx.doi.org/10.1016/j.scitotenv.2019.07.268

Ushiama S; Mayer-Pinto M; Bugnot AB; Johnston EL; Dafforn KA, 2019, 'Eco-engineering increases habitat availability and utilisation of seawalls by fish', Ecological Engineering, vol. 138, pp. 403 - 411, http://dx.doi.org/10.1016/j.ecoleng.2019.07.022

Gaw S; Harford A; Pettigrove V; Sevicke-Jones G; Manning T; Ataria J; Cresswell T; Dafforn KA; Leusch FDL; Moggridge B; Cameron M; Chapman J; Coates G; Colville A; Death C; Hageman K; Hassell K; Hoak M; Gadd J; Jolley DF; Karami A; Kotzakoulakis K; Lim R; McRae N; Metzeling L; Mooney T; Myers J; Pearson A; Saaristo M; Sharley D; Stuthe J; Sutherland O; Thomas O; Tremblay L; Wood W; Boxall ABA; Rudd MA; Brooks BW, 2019, 'Towards Sustainable Environmental Quality: Priority Research Questions for the Australasian Region of Oceania', Integrated Environmental Assessment and Management, vol. 15, pp. 917 - 935, http://dx.doi.org/10.1002/ieam.4180

Mayer-Pinto M; Dafforn KA; Johnston EL, 2019, 'A Decision Framework for Coastal Infrastructure to Optimize Biotic Resistance and Resilience in a Changing Climate', BioScience, vol. 69, pp. 833 - 843, http://dx.doi.org/10.1093/biosci/biz092

O'Brien AL; Dafforn KA; Chariton AA; Johnston EL; Mayer-Pinto M, 2019, 'After decades of stressor research in urban estuarine ecosystems the focus is still on single stressors: A systematic literature review and meta-analysis', Science of the Total Environment, vol. 684, pp. 753 - 764, http://dx.doi.org/10.1016/j.scitotenv.2019.02.131

Van den Brink PJ; Bracewell SA; Bush A; Chariton A; Choung CB; Compson ZG; Dafforn KA; Korbel K; Lapen DR; Mayer-Pinto M; Monk WA; O'Brien AL; Rideout NK; Schäfer RB; Sumon KA; Verdonschot RCM; Baird DJ, 2019, 'Towards a general framework for the assessment of interactive effects of multiple stressors on aquatic ecosystems: Results from the Making Aquatic Ecosystems Great Again (MAEGA) workshop', Science of the Total Environment, vol. 684, pp. 722 - 726, http://dx.doi.org/10.1016/j.scitotenv.2019.02.455

Gonzalez SV; Johnston E; Gribben PE; Dafforn K, 2019, 'The application of bioturbators for aquatic bioremediation: Review and meta-analysis', Environmental Pollution, vol. 250, pp. 426 - 436, http://dx.doi.org/10.1016/j.envpol.2019.04.023

Lachnit T; Dafforn KA; Johnston EL; Steinberg P, 2019, 'Contrasting distributions of bacteriophages and eukaryotic viruses from contaminated coastal sediments', Environmental Microbiology, vol. 21, pp. 1929 - 1941, http://dx.doi.org/10.1111/1462-2920.14340

Schaefer N; Dafforn KA; Johnston EL; Mayer-Pinto M, 2019, 'Size, depth and position affect the diversity and structure of rock pool communities in an urban estuary (vol 70, pg 1034, 2018)', MARINE AND FRESHWATER RESEARCH, vol. 70, pp. 1045 - +, http://dx.doi.org/10.1071/MF18074_CO

Bugnot AB; Hose GC; Walsh CJ; Floerl O; French K; Dafforn KA; Hanford J; Lowe EC; Hahs AK, 2019, 'Urban impacts across realms: Making the case for inter-realm monitoring and management', Science of the Total Environment, vol. 648, pp. 711 - 719, http://dx.doi.org/10.1016/j.scitotenv.2018.08.134

Macolino AC; Dafforn KA; Hedge LH; Poore AGB; Johnston EL, 2019, 'Fine-scale effects of boat moorings on soft sediment communities masked in large-scale comparisons', Frontiers in Marine Science, vol. 6, http://dx.doi.org/10.3389/fmars.2019.00101

Schaefer N; Dafforn KA; Johnston EL; Mayer-Pinto M, 2019, 'Size, depth and position affect the diversity and structure of rock pool communities in an urban estuary', Marine and Freshwater Research, vol. 70, pp. 1034 - 1044, http://dx.doi.org/10.1071/MF18074

Birrer SC; Dafforn KA; Sun MY; Williams RBH; Potts J; Scanes P; Kelaher BP; Simpson SL; Kjelleberg S; Swarup S; Steinberg P; Johnston EL, 2019, 'Using meta-omics of contaminated sediments to monitor changes in pathways relevant to climate regulation', Environmental Microbiology, vol. 21, pp. 389 - 401, http://dx.doi.org/10.1111/1462-2920.14470

Marzinelli EM; Qiu Z; Dafforn KA; Johnston EL; Steinberg PD; Mayer-Pinto M, 2018, 'Coastal urbanisation affects microbial communities on a dominant marine holobiont', npj Biofilms and Microbiomes, vol. 4, http://dx.doi.org/10.1038/s41522-017-0044-z

Heery EC; Dafforn KA; Smith JA; Ushiama S; Mayer-Pinto M, 2018, 'Not all artificial structures are created equal: Pilings linked to greater ecological and environmental change in sediment communities than seawalls', Marine Environmental Research, vol. 142, pp. 286 - 294, http://dx.doi.org/10.1016/j.marenvres.2018.08.012

Birrer SC; Dafforn KA; Simpson SL; Kelaher BP; Potts J; Scanes P; Johnston EL, 2018, 'Interactive effects of multiple stressors revealed by sequencing total (DNA) and active (RNA) components of experimental sediment microbial communities', Science of the Total Environment, vol. 637-638, pp. 1383 - 1394, http://dx.doi.org/10.1016/j.scitotenv.2018.05.065

Morris RL; Golding S; Dafforn KA; Coleman RA, 2018, 'Can coir increase native biodiversity and reduce colonisation of non-indigenous species in eco-engineered rock pools?', Ecological Engineering, vol. 120, pp. 622 - 630, http://dx.doi.org/10.1016/j.ecoleng.2017.06.038

Waltham NJ; Dafforn KA, 2018, 'Ecological engineering in the coastal seascape', Ecological Engineering, vol. 120, pp. 554 - 559, http://dx.doi.org/10.1016/j.ecoleng.2018.07.028

Bugnot AB; Mayer-Pinto M; Johnston EL; Schaefer N; Dafforn KA, 2018, 'Learning from nature to enhance Blue engineering of marine infrastructure', Ecological Engineering, vol. 120, pp. 611 - 621, http://dx.doi.org/10.1016/j.ecoleng.2018.03.012

Mayer-Pinto M; Dafforn KA; Bugnot AB; Glasby TM; Johnston EL, 2018, 'Artificial structures alter kelp functioning across an urbanised estuary', Marine Environmental Research, vol. 139, pp. 136 - 143, http://dx.doi.org/10.1016/j.marenvres.2018.05.004

Lee AL; Dafforn KA; Hutchings PA; Johnston EL, 2018, 'Reproductive strategy and gamete development of an invasive fanworm, sabella spallanzanii (polychaeta: Sabellidae), a field study in gulf st vincent, South Australia', PLoS ONE, vol. 13, http://dx.doi.org/10.1371/journal.pone.0200027

Tian C; Doblin MA; Dafforn KA; Johnston EL; Pei H; Hu W, 2018, 'Dinoflagellate cyst abundance is positively correlated to sediment organic carbon in Sydney Harbour and Botany Bay, NSW, Australia', Environmental Science and Pollution Research, vol. 25, pp. 5808 - 5821, http://dx.doi.org/10.1007/s11356-017-0886-1


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