Select Publications
Journal articles
2024, 'Methylation of elongation factor 1A by yeast Efm4 or human eEF1A-KMT2 involves a beta-hairpin recognition motif and crosstalks with phosphorylation', Journal of Biological Chemistry, 300, http://dx.doi.org/10.1016/j.jbc.2024.105639
,2023, 'Effect of Ginger Root Powder on Gastrointestinal Bacteria Composition, Gastrointestinal Symptoms, Mental Health, Fatigue, and Quality of Life: A Double-Blind Placebo-Controlled Trial', Journal of Nutrition, 153, pp. 3193 - 3206, http://dx.doi.org/10.1016/j.tjnut.2023.09.002
,2023, 'Cross-linking mass spectrometry discovers, evaluates, and corroborates structures and protein–protein interactions in the human cell', Proceedings of the National Academy of Sciences of the United States of America, 120, http://dx.doi.org/10.1073/pnas.2219418120
,2023, 'Evidence for a Putative Isoprene Reductase in Acetobacterium wieringae', mSystems, 8, pp. e00119 - e00123, http://dx.doi.org/10.1128/msystems.00119-23
,2022, 'Contaminant release, mixing and microbial fluctuations initiated by infiltrating water within a replica field-scale legacy radioactive waste trench', Science of the Total Environment, 851, http://dx.doi.org/10.1016/j.scitotenv.2022.158241
,2022, 'Metaproteomics reveals methyltransferases implicated in dichloromethane and glycine betaine fermentation by ‘Candidatus Formimonas warabiya’ strain DCMF', Frontiers in Microbiology, 13, pp. 1035247, http://dx.doi.org/10.3389/fmicb.2022.1035247
,2022, 'The Interplay Between Use of Biological Therapies, Psychological State, and the Microbiome in IBD', Frontiers in Medicine, 9, pp. 788992, http://dx.doi.org/10.3389/fmed.2022.788992
,2022, 'Characterisation of Bacteriophage vB_SmaM_Ps15 Infective to Stenotrophomonas maltophilia Clinical Ocular Isolates', Viruses, 14, pp. 709 - 709, http://dx.doi.org/10.3390/v14040709
,2021, 'Genomic Insights Into the Archaea Inhabiting an Australian Radioactive Legacy Site', Frontiers in Microbiology, 12, pp. 732575 - 732575, http://dx.doi.org/10.3389/fmicb.2021.732575
,2021, 'Biogeochemical Mobility of Contaminants from a Replica Radioactive Waste Trench in Response to Rainfall-Induced Redox Oscillations', Environmental Science and Technology, 55, pp. 8793 - 8805, http://dx.doi.org/10.1021/acs.est.1c01604
,2021, 'Biocrust cyanobacterial composition, diversity, and environmental drivers in two contrasting climatic regions in Brazil', Geoderma, 386, http://dx.doi.org/10.1016/j.geoderma.2020.114914
,2021, 'Community-led, integrated, reproducible multi-omics with anvi’o', Nature Microbiology, 6, pp. 3 - 6, http://dx.doi.org/10.1038/s41564-020-00834-3
,2020, 'Shed light in the dark lineages of the fungal tree of life—stres', Life, 10, pp. 1 - 13, http://dx.doi.org/10.3390/life10120362
,2020, 'Bacteriophage genotyping using BOXA repetitive-PCR', BMC Microbiology, 20, http://dx.doi.org/10.1186/s12866-020-01770-2
,2019, 'Genomic insights into the Archaea inhabiting an Australian radioactive legacy site', , http://dx.doi.org/10.1101/728089
,2018, 'Disentangling the drivers of functional complexity at the metagenomic level in Shark Bay microbial mat microbiomes', ISME Journal, 12, pp. 2619 - 2639, http://dx.doi.org/10.1038/s41396-018-0208-8
,2017, 'Response of microbial community function to fluctuating geochemical conditions within a legacy radioactive waste trench environment', Applied and Environmental Microbiology, 83, pp. e00729 - e00717, http://dx.doi.org/10.1128/AEM.00729-17
,2017, 'Uranium extraction from a low-grade, stockpiled, non-sulfidic ore: Impact of added iron and the native microbial consortia', Hydrometallurgy, 167, pp. 81 - 91, http://dx.doi.org/10.1016/j.hydromet.2016.11.002
,2017, 'Response of microbial community function to fluctuating geochemical conditions within a legacy radioactive waste trench environment', , http://dx.doi.org/10.1101/121376
,2015, 'Uranium Binding Mechanisms of the Acid-Tolerant Fungus Coniochaeta fodinicola', Environmental Science and Technology, 49, pp. 8487 - 8496, http://dx.doi.org/10.1021/acs.est.5b01342
,2015, 'Acidotolerant genus Fodinomyces (Ascomycota: Capnodiales) is a synonym of Acidiella', Czech Mycology, 67, pp. 37 - 38
,2014, 'Fodinomyces uranophilus gen. nov. sp. nov. and Coniochaeta fodinicola sp. nov., two uranium mine-inhabiting Ascomycota fungi from northern Australia', Mycologia, 106, pp. 1073 - 1089, http://dx.doi.org/10.3852/14-013
,2012, 'Isolation of novel benzo[a]anthracene-degrading microorganisms and continuous bioremediation in an expanded-bed bioreactor', Bioproc Biosystems Eng, 35, pp. 851 - 855, http://dx.doi.org/10.1007/s00449-011-0669-x
,2007, 'Lixiviación Microbiana', REBIGO, pp. 47 - 54
,Conference Papers
2012, 'The isolation of fungi from low-pH, high ionic strength uranium mine process water', in Proceedings of the 6th International Symposium on Biohydrometallurgy, Falmouth (UK), presented at 6th International Symposium on Biohydrometallurgy, Falmouth (UK), 18 June 2012 - 20 June 2012, http://dx.doi.org/10.13140/2.1.2786.9762
,Conference Posters
2019, 'P234 Longitudinal course of inflammatory bowel diseases: a model of microbial, immune, and neuropsychological integration', Vol. 13, pp. S213 - S214, https://academic.oup.com/ecco-jcc/article/13/Supplement_1/S213/5300882
,2018, 'New Archaea lineages from a radioactive legacy site'
,2018, 'OTUreporter: a modular automated pipeline for the analysis and report of amplicon data', http://dx.doi.org/10.6084/m9.figshare.6521171
,2018, 'OTUreporter: an automated pipeline for the analysis and report of amplicon sequencing data'
,2017, 'Impacts of dynamic geochemical conditions on plutonium and americium mobility at a legacy trench disposal site', Barcelona, Spain, presented at 16th International Conference on the Chemistry and Migration Behaviour of Actinides and Fission Products in the Geosphere, Barcelona, Spain, 10 September 2017 - 15 September 2017
,2017, 'Phylogenomics of a radioactive legacy site reveals new Archaea phyla of unknown function', Sydney, Australia, presented at Sydney Bioinformatics Research Symposium 2017, Sydney, Australia, 13 June 2017 - 13 June 2017
,2017, 'Understanding oat stem rust pathogen genome by PacBio sequencing', Sydney, Australia, presented at Sydney Bioinformatics Research Symposium 2017, Sydney, Australia, 13 June 2017 - 13 June 2017
,2016, 'Rainfall-mediated biogeochemical changes at a legacy radionuclide waste disposal site', Montreal, Canada, presented at 16th International Symposium on Microbial Ecology, Montreal, Canada, 21 August 2016 - 26 August 2016, http://dx.doi.org/10.6084/m9.figshare.3502709
,2014, 'Biogeochemical changes during experimental column leaching of a weathered uranium composite', Seoul, South Korea, presented at 15th International Symposium on Microbial Ecology, Seoul, South Korea, 24 August 2014 - 29 August 2014
,2010, 'Biodegradación de compuestos aromáticos contaminantes de suelos por hongos soportados en residuos agroindustriales [Biodegradation of pollutant aromatic compounds in soils by fungi supported on agroindustrial residues].'
,Conference Presentations
2019, 'Unusual DPANN Archaea from a radioactive legacy site'
,2018, 'Microbial profiling of the Himalayan Puga geothermal system: towards an astrobiological model'
,2017, 'Metagenomic and geochemical changes following rainfall at a legacy radionuclide waste disposal site', presented at Australian Microbial Ecology Conference - AusME 2017, Melbourne, Australia, 13 February 2017 - 15 February 2017
,2012, 'The isolation of fungi from low-pH, high ionic strength uranium mine process water'
,Conference Abstracts
2021, 'Biological therapies and bio-microbial dynamics in inflammatory bowel diseases', in JOURNAL OF CROHNS & COLITIS, OXFORD UNIV PRESS, Vol. 15, pp. S468 - S469, http://dx.doi.org/10.1093/ecco-jcc/jjab076.602
,2020, 'Biological therapies and the trajectories of biopsychological factors in inflammatory bowel diseases', in JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, WILEY, Vol. 35, pp. 108 - 108, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000589476200155&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2020, 'P289 Biological therapies and the trajectories of biopsychological factors in inflammatory bowel diseases', in Journal of Crohn's and Colitis, Oxford University Press (OUP), Vol. 14, pp. S296 - S297, http://dx.doi.org/10.1093/ecco-jcc/jjz203.418
,2019, 'Longitudinal course of inflammatory bowel diseases: A model of microbial, immune, and neuropsychological integration', in JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, WILEY, Vol. 34, pp. 140 - 142, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000483843100222&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2018, 'Role of iron in controlling radionuclide migration at a legacy waste site exhibiting dynamic redox transitions'
,Reports
2015, Biogeochemical controls of uranium heap leaching
,Theses / Dissertations
2015, Geomicrobiological aspects of the (bio)leaching of weathered low-grade uranium ore
,2008, Puesta a punto de metodologías de ecología molecular para el seguimiento de las poblaciones microbianas en un reactor indirecto para la biolixiviación de Zn a partir de concentrados de sulfuros polimetálicos [Set-up of molecular ecology methodologies for monitoring of the microbial populations in an indirect reactor for bioleaching of Zn from polimetalic sulphides concentrates], Universidad Autónoma de Madrid
,Preprints
2022, Cross-linking mass spectrometry discovers, evaluates, and validates the experimental and predicted structural proteome, http://dx.doi.org/10.1101/2022.11.16.516813
,2022, Evidence for a putative isoprene reductase inAcetobacterium wieringae, http://dx.doi.org/10.1101/2022.11.16.516518
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