Select Publications
Journal articles
2007, 'A Functional Polymorphism of Toll-Like Receptor 4 Gene Increases Risk of Gastric Carcinoma and Its Precursors', Gastroenterology, 132, pp. 905 - 912, http://dx.doi.org/10.1053/j.gastro.2006.12.026
,2006, 'Cellular and molecular aspects of gastric cancer', World Journal of Gastroenterology, 12, pp. 2979 - 2990, http://dx.doi.org/10.3748/wjg.v12.i19.2979
,2005, 'The role of cytokine gene polymorphisms in colorectal cancer and their interaction with aspirin use in the Northeast of Scotland', Cancer Epidemiology Biomarkers and Prevention, 14, pp. 1613 - 1618, http://dx.doi.org/10.1158/1055-9965.EPI-04-0878
,2005, 'Role of the polymorphic IL-1B, IL-1RN and TNF-A genes in distal gastric cancer in Mexico', International Journal of Cancer, 114, pp. 237 - 241, http://dx.doi.org/10.1002/ijc.20718
,2005, 'Sporadic colorectal cancer - Role of the commensal microbiota', FEMS Microbiology Letters, 244, pp. 1 - 7, http://dx.doi.org/10.1016/j.femsle.2005.01.029
,2005, 'Development of a method for the quantification of haddock (Melanogrammus aeglefinus) in commercial products using real-time PCR', European Food Research and Technology, 220, pp. 633 - 637, http://dx.doi.org/10.1007/s00217-004-1050-y
,2004, 'Isolation, growth on prebiotics and probiotic potential of novel bifidobacteria from pigs', Anaerobe, 10, pp. 33 - 39, http://dx.doi.org/10.1016/j.anaerobe.2003.11.005
,2004, 'Inflammation and Cancer II. Role of chronic inflammation and cytokine gene polymorphisms in the pathogenesis of gastrointestinal malignancy', American Journal of Physiology - Gastrointestinal and Liver Physiology, 286, http://dx.doi.org/10.1152/ajpgi.00475.2003
,2003, 'Oceanicaulis alexandrii gen. nov., sp. nov., a novel stalked bacterium isolated from a culture of the dinoflagellate Alexandrium tamarense (Lebour) Balech', International Journal of Systematic and Evolutionary Microbiology, 53, pp. 1901 - 1906, http://dx.doi.org/10.1099/ijs.0.02635-0
,2003, 'Identification of gadoid fish species using DNA-based techniques', European Food Research and Technology, 217, pp. 259 - 264, http://dx.doi.org/10.1007/s00217-003-0735-y
,2003, 'Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces', Applied and Environmental Microbiology, 69, pp. 4320 - 4324, http://dx.doi.org/10.1128/AEM.69.7.4320-4324.2003
,2003, 'Role of polymorphism of certain cytokines in gastric cancer in Mexico. Preliminary results', Revista de gastroenterología de México, 68, pp. 107 - 112
,2003, 'The role of interleukin-1beta and other potential genetic markers as indicators of gastric cancer risk.', Canadian journal of gastroenterology = Journal canadien de gastroenterologie, 17 Suppl B, http://dx.doi.org/10.1155/2003/397060
,2002, 'The microbiology of butyrate formation in the human colon', FEMS Microbiology Letters, 217, pp. 133 - 139, http://dx.doi.org/10.1016/S0378-1097(02)01106-0
,2002, 'The microbiology of butyrate formation in the human colon', FEMS Microbiology Letters, 217, pp. 133 - 139, http://dx.doi.org/10.1016/s0378-1097(02)01106-0
,2002, 'Differentiation of raw or processed eel by PCR-based techniques: Restriction fragment length polymorphism analysis (RFLP) and single strand conformation polymorphism analysis (SSCP)', European Food Research and Technology, 214, pp. 171 - 177, http://dx.doi.org/10.1007/s00217-001-0457-y
,2002, 'Growth requirements and fermentation products of Fusobacterium prausnitzii, and a proposal to reclassify it as Faecalibacterium prausnitzii gen. nov., comb. nov', International Journal of Systematic and Evolutionary Microbiology, 52, pp. 2141 - 2146, http://dx.doi.org/10.1099/ijs.0.02241-0
,2002, 'Growth requirements and fermentation products of Fusobacterium prausnitzii, and a proposal to reclassify it as Faecalibacterium prausnitzii gen. nov., comb. nov', INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 52, pp. 2141 - 2146, http://dx.doi.org/10.1099/ijs.0.02241-0
,2002, 'Roseburia intestinalis sp. nov., a novel saccharolytic, butyrate-producing bacterium from human faeces', International Journal of Systematic and Evolutionary Microbiology, 52, pp. 1615 - 1620, http://dx.doi.org/10.1099/ijs.0.02143-0
,2002, 'Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis', FEMS Microbiology Ecology, 39, pp. 33 - 39, http://dx.doi.org/10.1016/S0168-6496(01)00190-8
,2002, 'Differentiation of raw or processed eel by PCR-based techniques: restriction fragment length polymorphism analysis (RFLP) and single strand conformation polymorphism analysis (SSCP)', EUROPEAN FOOD RESEARCH AND TECHNOLOGY, 214, pp. 171 - 177, http://dx.doi.org/10.1007/s00217-001-0457-y
,2002, 'Anaerostipes caccae gen. nov., sp. nov., a new saccharolytic, acetate-utilising, butyrate-producing bacterium from human faeces', Systematic and Applied Microbiology, 25, pp. 46 - 51, http://dx.doi.org/10.1078/0723-2020-00096
,2002, 'Identification of Cephalopod Species (Ommastrephidae and Loliginidae) in Seafood Products by Forensically Informative Nucleotide Sequencing (FINS)', Journal of Food Science, 67, pp. 1672 - 1676, http://dx.doi.org/10.1111/j.1365-2621.2002.tb08703.x
,2002, 'Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis', FEMS Microbiology Ecology, 39, pp. 33 - 39, http://dx.doi.org/10.1016/s0168-6496(01)00190-8
,2001, 'Identification of hake species (Merluccius genus) using sequencing and PCR-RFLP analysis of mitochondrial DNA control region sequences', Journal of Agricultural and Food Chemistry, 49, pp. 5108 - 5114, http://dx.doi.org/10.1021/jf010421f
,2001, 'Characterisation of bacterial communities associated with toxic and non-toxic dinoflagellates: Alexandrium spp. and Scrippsiella trochoidea', FEMS Microbiology Ecology, 37, pp. 161 - 173, http://dx.doi.org/10.1016/S0168-6496(01)00157-X
,2001, 'Development of a DNA-based method aimed at identifying the fish species present in food products', Journal of Agricultural and Food Chemistry, 49, pp. 1175 - 1179, http://dx.doi.org/10.1021/jf001149x
,2001, 'Comparison of paralytic shellfish toxin (PST) production by the dinoflagellates Alexandrium lusitanicum NEPCC 253 and Alexandrium tamarense NEPCC 407 in the presence and absence of bacteria', FEMS Microbiology Ecology, 36, pp. 223 - 234, http://dx.doi.org/10.1016/S0168-6496(01)00136-2
,2001, 'Identification of flatfish (Pleuronectiforme) species using DNA-based techniques', Journal of Agricultural and Food Chemistry, 49, pp. 4562 - 4569, http://dx.doi.org/10.1021/jf010452a
,2001, 'Validation of a PCR-RFLP based method for the identification of salmon species in food products', European Food Research and Technology, 212, pp. 385 - 389, http://dx.doi.org/10.1007/s002170000237
,2001, 'Characterisation of bacterial communities associated with toxic and non-toxic dinoflagellates: Alexandrium spp. and Scrippsiella trochoidea', FEMS Microbiology Ecology, 37, pp. 161 - 173, http://dx.doi.org/10.1016/s0168-6496(01)00157-x
,2001, 'Comparison of paralytic shellfish toxin (PST) production by the dinoflagellates Alexandrium lusitanicum NEPCC 253 and Alexandrium tamarense NEPCC 407 in the presence and absence of bacteria', FEMS Microbiology Ecology, 36, pp. 223 - 234, http://dx.doi.org/10.1016/s0168-6496(01)00136-2
,2000, 'Use of restriction fragment length polymorphism to distinguish between salmon species', Journal of Agricultural and Food Chemistry, 48, pp. 2184 - 2188, http://dx.doi.org/10.1021/jf991213e
,Conference Papers
2024, 'P107 Is gut microbiome diversity important at IBD onset? A systematic review of the literature and meta-analysis of alpha diversity data', in Poster Presentations, BMJ Publishing Group Ltd and British Society of Gastroenterology, pp. A114 - A115, presented at BSG LIVE’24, 17-20 June 2024, ICC Birmingham, http://dx.doi.org/10.1136/gutjnl-2024-bsg.189
,2022, 'Emulsifier intake in a cohort of Australians with inflammatory bowel disease', in JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, WILEY, pp. 219 - 219, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000852585700328&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2018, 'FMT AS A TREATMENT FOR IBD: A NATIONAL SURVEY OF GASTROENTEROLOGISTS IN THE UK', in GUT, BMJ PUBLISHING GROUP, ENGLAND, Liverpool, pp. A86 - A86, presented at Annual General Meeting of the British-Society-of-Gastroenterology, ENGLAND, Liverpool, 04 June 2018 - 07 June 2018, http://dx.doi.org/10.1136/gutjnl-2018-BSGAbstracts.171
,2018, 'FMT as a treatment for IBD: A national survey of gastroenterologists in the UK', in JOURNAL OF CROHNS & COLITIS, OXFORD UNIV PRESS, pp. S443 - S444, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000427318902042&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2017, 'Vitamin D supplementation reduces fecal calprotectin and may alter microbiota composition in patients with active ulcerative colitis', in JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, WILEY, pp. 117 - 117, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000407897100212&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2017, 'DEFINING GENOME DIVERSITY OF CAMPYLOBACTER CONCISUS BETWEEN ORAL, FAECAL AND COLONIC BIOPSY ISOLATES', in GUT, BMJ PUBLISHING GROUP, ENGLAND, Manchester, pp. A129 - A129, presented at Annual General Meeting of the British-Society-of-Gastroenterology (BSG), ENGLAND, Manchester, 19 June 2017 - 22 June 2017, http://dx.doi.org/10.1136/gutjnl-2017-314472.252
,2017, 'ELUCIDATING THE PATHOGENIC POTENTIAL OF THE INTESTINAL PATHOGEN CAMPYLOBACTER SHOWAE', in GUT, BMJ PUBLISHING GROUP, ENGLAND, Manchester, pp. A138 - A138, presented at Annual General Meeting of the British-Society-of-Gastroenterology (BSG), ENGLAND, Manchester, 19 June 2017 - 22 June 2017, http://dx.doi.org/10.1136/gutjnl-2017-314472.271
,2016, 'Transporters for Antiretroviral Drugs in Colorectal CD4+T Cells and Circulating alpha 4 beta 7 Integrin CD4+T Cells: Implications for HIV Microbicides', in AIDS RESEARCH AND HUMAN RETROVIRUSES, MARY ANN LIEBERT, INC, IL, Chicago, pp. 353 - 353, presented at Conference on HIV Research for Prevention (HIV R4P), IL, Chicago, 17 October 2016 - 20 October 2016, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000386774600656&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2016, 'Toll-like receptor 8 polymorphisms in Helicobacter pylori infection', in EUROPEAN JOURNAL OF IMMUNOLOGY, WILEY-BLACKWELL, AUSTRALIA, Melbourne, pp. 637 - 637, presented at International Congress of Immunology (ICI), AUSTRALIA, Melbourne, 21 August 2016 - 26 August 2016, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000383610401470&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2016, 'CYTOPLASMIC EXPRESSION OF HMGB1 IS ASSOCIATED WITH EARLY COLORECTAL CARCINOGENESIS', in GUT, BMJ PUBLISHING GROUP, pp. A192 - A192, http://dx.doi.org/10.1136/gutjnl-2016-312388.354
,2016, 'ELUCIDATING THE ROLE OF NON JEJUNI/COLI-CAMPYLOBACTER IN THE DEVELOPMENT OF COLORECTAL CANCER UTILISING COMPARATIVE GENOMICS TO STUDY THEIR PATHOGENIC POTENTIAL', in GUT, BMJ PUBLISHING GROUP, pp. A188 - A189, http://dx.doi.org/10.1136/gutjnl-2016-312388.347
,2016, 'NATURAL HISTORY OF CIRRHOSIS IN A COHORT OF PATIENTS UNDERGOING STRUCTURED SURVEILLANCE FOR HEPATOCELLULAR CARCINOMA: RESULTS FROM THE ABERDEEN SURVEILLANCE COHORT', in GUT, BMJ PUBLISHING GROUP, pp. A158 - A159, http://dx.doi.org/10.1136/gutjnl-2016-312388.286
,2015, 'Evaluating the impact of a national rotavirus vaccine programme on circulating strain types and identifying possible vaccine failures', in JOURNAL OF CLINICAL VIROLOGY, ELSEVIER SCIENCE BV, pp. S68 - S68, http://dx.doi.org/10.1016/j.jcv.2015.07.160
,2015, 'GENOTYPING OF ROTAVIRUS ISOLATES PRIOR TO THE INTRODUCTION OF THE ROTAVIRUS VACCINE IN SCOTLAND AND EARLY INDICATIONS OF THE IMPACT OF THE VACCINE', in GUT, BMJ PUBLISHING GROUP, ENGLAND, London, pp. A510 - A511, presented at 2nd Digestive-Disorders-Federation Conference, ENGLAND, London, 22 June 2015 - 25 June 2015, http://dx.doi.org/10.1136/gutjnl-2015-309861.1116
,2015, 'The Impact of NOD2 Variants on Gut Microbiota in Crohn's Disease and Healthy Controls', in GASTROENTEROLOGY, W B SAUNDERS CO-ELSEVIER INC, DC, Washington, pp. S718 - S718, presented at 46th Annual Digestive Disease Week (DDW), DC, Washington, 16 May 2015 - 19 May 2015, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000360118800417&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2014, 'Characterisation of Drug Transporter Gene Expression in Colorectal Tissue and Cell Lines: Induction with Anti-retrovirals for Microbicide Optimization', in AIDS RESEARCH AND HUMAN RETROVIRUSES, MARY ANN LIEBERT, INC, SOUTH AFRICA, Cape Town, pp. A201 - A201, presented at Symposium on HIV Research for Prevention (HIV R4P), SOUTH AFRICA, Cape Town, 28 October 2014 - 31 October 2014, http://dx.doi.org/10.1089/aid.2014.5433.abstract
,2014, 'Expression of Drug Transporters in Cervicovaginal Cell Lines and Modulatory Effect of Candidate Antiretroviral Microbicides', in AIDS RESEARCH AND HUMAN RETROVIRUSES, MARY ANN LIEBERT, INC, SOUTH AFRICA, Cape Town, pp. A201 - A201, presented at Symposium on HIV Research for Prevention (HIV R4P), SOUTH AFRICA, Cape Town, 28 October 2014 - 31 October 2014, http://dx.doi.org/10.1089/aid.2014.5434.abstract
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