Select Publications
Book Chapters
2015, 'The SWHEL system for high-resolution analysis of in vivo antigen-specific T-dependent B cell responses', in T Follicular Helper Cells: Methods and Protocols, pp. 103 - 123, http://dx.doi.org/10.1007/978-1-4939-2498-1_9
,Journal articles
2024, 'Retinoic acid and TGF-β orchestrate organ-specific programs of tissue residency', Immunity, 57, pp. 2615 - 2633.e10, http://dx.doi.org/10.1016/j.immuni.2024.09.015
,2024, 'Painful memories boost protective immunity', Cell Research, 34, pp. 751 - 752, http://dx.doi.org/10.1038/s41422-024-01002-6
,2024, 'Protein isoform-centric therapeutics: expanding targets and increasing specificity', Nature Reviews Drug Discovery, 23, pp. 759 - 779, http://dx.doi.org/10.1038/s41573-024-01025-z
,2024, 'Temporally resolved proteomics identifies nidogen-2 as a cotarget in pancreatic cancer that modulates fibrosis and therapy response', Science Advances, 10, http://dx.doi.org/10.1126/sciadv.adl1197
,2024, 'Chemotherapy and the Extra-Tumor Immune Microenvironment: EXTRA-TIME', Cancer Discovery, 14, pp. 643 - 647, http://dx.doi.org/10.1158/2159-8290.CD-23-1543
,2023, 'ENTRAIN: integrating trajectory inference and gene regulatory networks with spatial data to co-localize the receptor–ligand interactions that specify cell fate', Bioinformatics, 39, http://dx.doi.org/10.1093/bioinformatics/btad765
,2023, 'Minimally invasive longitudinal intravital imaging of cellular dynamics in intact long bone', Nature Protocols, 18, pp. 3856 - 3880, http://dx.doi.org/10.1038/s41596-023-00894-9
,2023, 'Infection and Vaccine Induced Spike Antibody Responses Against SARS-CoV-2 Variants of Concern in COVID-19-Naïve Children and Adults', Journal of Clinical Immunology, 43, pp. 1706 - 1723, http://dx.doi.org/10.1007/s10875-023-01540-5
,2023, 'Monitoring AKT activity and targeting in live tissue and disease contexts using a real-time Akt-FRET biosensor mouse', Science Advances, 9, http://dx.doi.org/10.1126/sciadv.adf9063
,2023, 'β-cell function is regulated by metabolic and epigenetic programming of islet-associated macrophages, involving Axl, Mertk, and TGFβ receptor signaling', iScience, 26, http://dx.doi.org/10.1016/j.isci.2023.106477
,2023, 'Apoptotic cell fragments locally activate tingible body macrophages in the germinal center', Cell, 186, pp. 1144 - 1161.e18, http://dx.doi.org/10.1016/j.cell.2023.02.004
,2023, 'Epstein–Barr virus and multiple sclerosis: the dawn of a new age', Clinical and Translational Immunology, 12, http://dx.doi.org/10.1002/cti2.1457
,2023, 'Invasion-Block and S-MARVEL: A high-content screening and image analysis platform identifies ATM kinase as a modulator of melanoma invasion and metastasis', Proceedings of the National Academy of Sciences of the United States of America, 120, http://dx.doi.org/10.1073/pnas.2303978120
,2023, 'Tracking the clonal dynamics of SARS-CoV-2-specific T cells in children and adults with mild/asymptomatic COVID-19', Clinical Immunology, 246, http://dx.doi.org/10.1016/j.clim.2022.109209
,2022, 'High titre neutralizing antibodies in response to SARS–CoV–2 infection require RBD–specific CD4 T cells that include proliferative memory cells', Frontiers in Immunology, 13, http://dx.doi.org/10.3389/fimmu.2022.1032911
,2022, 'Gene expression predicts dormant metastatic breast cancer cell phenotype', Breast Cancer Research, 24, http://dx.doi.org/10.1186/s13058-022-01503-5
,2022, 'EmBmem: will the real memory B cell please stand up?', Trends in Immunology, 43, pp. 595 - 597, http://dx.doi.org/10.1016/j.it.2022.05.001
,2022, 'Recommendations for next generation sequencing data reanalysis of unsolved cases with suspected Mendelian disorders: A systematic review and meta-analysis', Genetics in Medicine, 24, pp. 1618 - 1629, http://dx.doi.org/10.1016/j.gim.2022.04.021
,2022, 'Early expansion of CD38+ICOS+ GC Tfh in draining lymph nodes during influenza vaccination immune response', iScience, 25, pp. 103656, http://dx.doi.org/10.1016/j.isci.2021.103656
,2021, 'Osteocyte transcriptome mapping identifies a molecular landscape controlling skeletal homeostasis and susceptibility to skeletal disease', Nature Communications, 12, pp. 2444, http://dx.doi.org/10.1038/s41467-021-22517-1
,2021, 'Intrinsic Defects in B Cell Development and Differentiation, T Cell Exhaustion and Altered Unconventional T Cell Generation Characterize Human Adenosine Deaminase Type 2 Deficiency', Journal of Clinical Immunology, 41, pp. 1915 - 1935, http://dx.doi.org/10.1007/s10875-021-01141-0
,2021, 'Preservation of Gastrointestinal Mucosal Barrier Function and Microbiome in Patients With Controlled HIV Infection', Frontiers in Immunology, 12, pp. 688886, http://dx.doi.org/10.3389/fimmu.2021.688886
,2021, 'Erratum: Osteoclasts recycle via osteomorphs during RANKL-stimulated bone resorption (Cell (2021) 184(5) (1330–1347.e13), (S0092867421001525), (10.1016/j.cell.2021.02.002))', Cell, 184, pp. 1940, http://dx.doi.org/10.1016/j.cell.2021.03.010
,2021, 'Osteoclasts recycle via osteomorphs during RANKL-stimulated bone resorption', Cell, 184, pp. 1330 - 1347.e13, http://dx.doi.org/10.1016/j.cell.2021.02.002
,2021, 'No evidence that plasmablasts transdifferentiate into developing neutrophils in severe COVID-19 disease', Clinical and Translational Immunology, 10, http://dx.doi.org/10.1002/cti2.1308
,2020, 'Everolimus-Induced Remission of Classic Kaposi’s Sarcoma Secondary to Cryptic Splicing Mediated CTLA4 Haploinsufficiency', Journal of Clinical Immunology, 40, pp. 774 - 779, http://dx.doi.org/10.1007/s10875-020-00804-8
,2020, 'The Clinical Immunogenomics Research Consortium Australasia (CIRCA): a Distributed Network Model for Genomic Healthcare Delivery', Journal of Clinical Immunology, 40, pp. 763 - 766, http://dx.doi.org/10.1007/s10875-020-00787-6
,2020, 'The dormant cancer cell life cycle', Nature Reviews Cancer, 20, pp. 398 - 411, http://dx.doi.org/10.1038/s41568-020-0263-0
,2020, 'The geography of memory B cell reactivation in vaccine-induced immunity and in autoimmune disease relapses', Immunological Reviews, 296, pp. 62 - 86, http://dx.doi.org/10.1111/imr.12862
,2020, 'Prostate cancer cell-intrinsic interferon signaling regulates dormancy and metastatic outgrowth in bone', EMBO Reports, 21, http://dx.doi.org/10.15252/embr.202050162
,2019, 'High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes', Nature Communications, 10, http://dx.doi.org/10.1038/s41467-019-11049-4
,2019, 'Autoinflammation Masquerading as Autoimmunity in an Adult with Heterozygous p.E250K PSTPIP1 Mutation', Journal of Clinical Immunology, 39, pp. 519 - 522, http://dx.doi.org/10.1007/s10875-019-00646-z
,2019, 'A niche-dependent myeloid transcriptome signature defines dormant myeloma cells', Blood, 134, pp. 30 - 43, http://dx.doi.org/10.1182/blood.2018880930
,2019, 'Hematopoietic stem cell transplant effectively rescues lymphocyte differentiation and function in DOCK8-deficient patients', JCI Insight, 4, http://dx.doi.org/10.1172/jci.insight.127527
,2019, 'B cell–intrinsic requirement for STK4 in humoral immunity in mice and human subjects', Journal of Allergy and Clinical Immunology, 143, pp. 2302 - 2305, http://dx.doi.org/10.1016/j.jaci.2019.02.010
,2019, 'Galene: correcting physiological motion blurring at the subcellular level in intravital FLIM data', eLife, 7, http://dx.doi.org/10.7554/eLife.35800
,2019, 'Subcapsular Sinus Macrophages: The Seat of Innate and Adaptive Memory in Murine Lymph Nodes', Trends in Immunology, 40, pp. 35 - 48, http://dx.doi.org/10.1016/j.it.2018.11.004
,2018, 'Memory B cells are reactivated in subcapsular proliferative foci of lymph nodes', Nature Communications, 9, pp. 3372, http://dx.doi.org/10.1038/s41467-018-05772-7
,2018, 'Germline-activating mutations in PIK3CD compromise B cell development and function', Journal of Experimental Medicine, 215, pp. 2073 - 2095, http://dx.doi.org/10.1084/jem.20180010
,2018, 'B cells race the clock to get a second wind', Nature Immunology, 19, pp. 791 - 793, http://dx.doi.org/10.1038/s41590-018-0166-3
,2018, 'Removing physiological motion from Intravital and clinical functional imaging data', eLife, 7, http://dx.doi.org/10.7554/eLife.35800
,2018, 'Generation of memory B cells and their reactivation', Immunological Reviews, 283, pp. 138 - 149, http://dx.doi.org/10.1111/imr.12640
,2018, 'Self-Reactive B Cells in the Germinal Center Reaction', Annual Review of Immunology, 36, pp. 339 - 357, http://dx.doi.org/10.1146/annurev-immunol-051116-052510
,2018, 'Reversible Suppression of Lymphoproliferation and Thrombocytopenia with Rapamycin in a Patient with Common Variable Immunodeficiency', Journal of Clinical Immunology, 38, pp. 159 - 162, http://dx.doi.org/10.1007/s10875-018-0477-z
,2018, 'High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes', , http://dx.doi.org/10.1101/424945
,2017, 'Here, there and everywhere: T follicular helper cells on the move', Immunology, 152, pp. 382 - 387, http://dx.doi.org/10.1111/imm.12793
,2017, 'Defective protein prenylation is a diagnostic biomarker of mevalonate kinase deficiency', Journal of Allergy and Clinical Immunology, 140, pp. 873 - 875.e6, http://dx.doi.org/10.1016/j.jaci.2017.02.033
,2017, 'Impaired Intestinal Permeability Contributes to Ongoing Bowel Symptoms in Patients With Inflammatory Bowel Disease and Mucosal Healing', Gastroenterology, 153, pp. 723 - 731.e1, http://dx.doi.org/10.1053/j.gastro.2017.05.056
,2017, 'Inhibiting the osteocyte-specific protein sclerostin increases bone mass and fracture resistance in multiple myeloma', Blood, 129, pp. 3452 - 3464, http://dx.doi.org/10.1182/blood-2017-03-773341
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