Select Publications


El-Omar EM, 2012, Foreword,

Book Chapters

El‐Omar EM; Yim H, 2022, 'Tumors of the stomach', in , Wiley, pp. 1023 - 1046,

Craig PI; El‐Omar EM, 2022, 'Tumors of the stomach', in , Wiley, pp. 170 - 176,

Angus BJ; Anstee QM; Burnett L; Byers M; Campbell H; Clunie GPR; Colvin LA; Conway B; Cooper N; Cracknell AL; Culligan DJ; Dark GG; Davenport RJ; Dockrell DH; El-Omar E; Fallon M; FitzPatrick DR; Grubb NR; Ibbotson SH; Innes JA; Jenks SJ; Johnston SL; Jones DEJ; Langhorne P; Lawrie SM; Leach JP; Maartens G; Mackillop L; MacMahon MJ; Mann R; Manson LM; Marshall SE; Mather A; Maxwell SR; McAllister DA; McCrimmon RJ; McLean M; Neuberger FEM; Newby DE; Newell-Price JDC; Olson J; Pearson ER; Phelan PJ; Ralston SH; Reid PT; Sandoe JAT; Scott GR; Shand AG; Steel RM; Stewart GD; Stewart P; Strachan MWJ; Sullivan DR; Sundar S; Tallentire VR; Tatton-Brown K; Thomas SHL; Watson HG; White J; Wilding JPH; Witham MD, 2022, 'Participants aux Davidson's Principles and Practice of Medicine, 23eédition', in Davidson : L'essentiel de la Médecine, Elsevier, pp. ix - xiv,

El-Assaad F; Gong L; Gia A; Yim H; El-Omar E, 2019, 'Helicobacter pylori, peptic ulcer disease and gastric cancer', in Eslick G (ed.), Gastrointestinal Diseases and Their Associated Infections, Elsevier, St Louis, pp. 17 - 29,

Wong MYW; El-Omar E, 2019, 'Connective Tissue Disorders, Gastrointestinal Tract Manifestations of', in Encyclopedia of Gastroenterology, Second Edition, pp. 727 - 733,

Wu N; Yim HCH; Grimm M; El-Omar E, 2019, 'Epithelial Barrier Function', in Encyclopedia of Gastroenterology, Second Edition, pp. 300 - 313,

Wong MYW; El-Omar E, 2019, 'Vasculitis, Gastrointestinal Manifestations of', in Encyclopedia of Gastroenterology, Second Edition, pp. 700 - 706,

El-Assaad F; Gong L; Gia A; Yim HCH; El-Omar EM, 2019, 'Chapter 2 Helicobacter pylori, Peptic Ulcer Disease and Gastric Cancer', in Gastrointestinal Diseases and their Associated Infections, Elsevier, pp. 17 - 29,

El-Omar EM; Wu CY, 2016, 'Tumors of the stomach', in Podolsky DK; Camilleri M; Fitz JG; Kalloo AN; Shanahan F; Wang TC (ed.), Yamada's Atlas of Gastroenterology, John Wiley & Sons, pp. 149 - 152

McLean MH; Nicoll R; Saw C; Hold GL; El-Omar EM, 2016, 'Influence of host gene polymorphisms on development of gastroduodenal diseases', in Helicobacter pylori Research: From Bench to Bedside, pp. 339 - 362,

El‐Omar EM; McLean MH, 2015, 'Tumors of the Stomach', in , Wiley, pp. 1121 - 1140,

El-Omar EM, 2009, 'Role of host genetic susceptibility in the pathogenesis of gastric cancer', in The Biology of Gastric Cancers, pp. 235 - 250,

McKinlay A; Park K; Gunasekera R; El-Omar EM, 2003, 'Gastric Cancer in the Elderly', in Interdisciplinary Topics in Gerontology, KARGER, pp. 145 - 156,

McColl KEL; Gillen D; El-Omar E; Oien K; Dahill S, 1996, 'Helicobacter pylori gastritis and gastric acid secretory function — an integrated approach', in Helicobacter pylori, Springer Netherlands, pp. 122 - 131,

McColl KEL; El-Omar E, 1994, 'Effect of H. pylori infection on gastrin and gastric acid secretion', in Helicobacter pylori, Springer Netherlands, pp. 245 - 256,

El-Omar EM, 'Analysis of Single Nucleotide Polymorphisms in the Interleukin-1B Gene Using 5' Nuclease Assays', in Interleukin Protocols, Humana Press, pp. 409 - 417,

Journal articles

Malfertheiner P; Camargo MC; El-Omar E; Liou JM; Peek R; Schulz C; Smith SI; Suerbaum S, 2023, 'Helicobacter pylori infection', Nature Reviews Disease Primers, 9,

Li P; Shuai P; Shen S; Zheng H; Sun P; Zhang R; Lan S; Lan Z; Jayawardana T; Yang Y; Zhao J; Liu Y; Chen X; El-Omar EM; Wan Z, 2023, 'Perturbations in gut microbiota composition in patients with polycystic ovary syndrome: a systematic review and meta-analysis', BMC Medicine, 21,

Omary MB; Leddin D; Metz G; Veitch AM; El-Omar EM; Macedo G; Perman ML, 2023, 'World Gastroenterology Organisation - Gut commentary series on digestive health and climate change.', Gut,

Strout N; Pasic L; Hicks C; Chua XY; Tashvighi N; Butler P; Liu Z; El-Assaad F; Holmes E; Susic D; Samaras K; Craig ME; Davis GK; Henry A; Ledger WL; El-Omar EM, 2023, 'The MothersBabies Study, an Australian Prospective Cohort Study Analyzing the Microbiome in the Preconception and Perinatal Period to Determine Risk of Adverse Pregnancy, Postpartum, and Child-Related Health Outcomes: Study Protocol', International Journal of Environmental Research and Public Health, 20,

Chen MJ; Chen PY; Fang YJ; Bair MJ; Chen CC; Chen CC; Yang TH; Lee JY; Yu CC; Kuo CC; Chiu MC; Chou CK; Chen CY; Hu WH; Tsai MH; Hsu YC; Shun CT; Luo JC; Lin JT; El-Omar EM; Wu MS; Liou JM, 2023, 'Molecular testing-guided therapy versus susceptibility testing-guided therapy in first-line and third-line Helicobacter pylori eradication: two multicentre, open-label, randomised controlled, non-inferiority trials', The Lancet Gastroenterology and Hepatology, 8, pp. 623 - 634,

Camilleri M; El-Omar EM, 2023, 'Ten reasons gastroenterologists and hepatologists should be treating obesity', Gut, 72, pp. 1033 - 1038,

Liou JM; Jiang XT; Chen CC; Luo JC; Bair MJ; Chen PY; Chou CK; Fang YJ; Chen MJ; Chen CC; Lee JY; Yang TH; Yu CC; Kuo CC; Chiu MC; Chen CY; Shun CT; Hu WH; Tsai MH; Hsu YC; Tseng CH; Chang CY; Lin JT; El-Omar EM; Wu MS; Wu CY; Lee YC; Tseng PH; Wu JY; Tai CM; Lee CT; Wang WL, 2023, 'Second-line levofloxacin-based quadruple therapy versus bismuth-based quadruple therapy for Helicobacter pylori eradication and long-term changes to the gut microbiota and antibiotic resistome: a multicentre, open-label, randomised controlled trial', The Lancet Gastroenterology and Hepatology, 8, pp. 228 - 241,

Gow ML; Chua XY; El-Omar E; Susic D; Henry A, 2023, 'Relationship between Diet Quality and Maternal Stool Microbiota in the MUMS Australian Pregnancy Cohort', Nutrients, 15,

Maloney S; Tebbutt N; Nikfarjam M; Samra J; Mendis S; Tie J; Christopherson L; Hayes S; Berthon-Jones N; Yim CHH; El-Omar E; Chantrill L, 2023, '1683TiP Trial in progress: NEO-adjuvant chemo-IMmunotherapy in PAnCreaTic cancer-NEO-IMPACT', Annals of Oncology, 34, pp. S922 - S922,


El-Omar EM, 2023, 'Future directions in the microbiome field: an editor’s perspective', eGastroenterology, 1, pp. e100003 - e100003,

Zhang F; Gia A; Chen G; Gong L; Behary J; Hold GL; Zekry A; Tang X; Sun Y; El-Omar E; Jiang XT, 2022, 'Critical Assessment of Whole Genome and Viral Enrichment Shotgun Metagenome on the Characterization of Stool Total Virome in Hepatocellular Carcinoma Patients', Viruses, 15,

Zekry A; El-Omar EM, 2022, 'A Tale of Two Fibers: A Liver Twist!', Gastroenterology, 163, pp. 1495 - 1497,

Pandey D; Szczesniak M; Maclean J; Yim HCH; Zhang F; Graham P; El-Omar EM; Wu P, 2022, 'Dysbiosis in Head and Neck Cancer: Determining Optimal Sampling Site for Oral Microbiome Collection', Pathogens, 11,

Chen J; Zeng P; Gong L; Zhang X; Ling Z; Bi K; Shi F; Wang K; Zhang Q; Jiang J; Zhang Y; Uede T; El-Omar EM; Diao H, 2022, 'Osteopontin Exacerbates High-Fat Diet-Induced Metabolic Disorders in a Microbiome-Dependent Manner', mBio, 13,

Hosseini-Giv N; Basas A; Hicks C; El-Omar E; El-Assaad F; Hosseini-Beheshti E, 2022, 'Bacterial extracellular vesicles and their novel therapeutic applications in health and cancer', Frontiers in Cellular and Infection Microbiology, 12,

O'Donnell M; Teasdale S; Chua X-Y; Hardman J; Wu N; Curtis J; Samaras K; Bolton P; Morris M; Shannon-Weickert C; Purves-Tyson T; El-Assaad F; Jiang X; Hold G; El-Omar E, 2022, 'The role of the microbiome in the metabolic health of people with schizophrenia and related psychoses: cross-sectional and pre-post lifestyle intervention analyses', Pathogens

Luo Z; Li M; Yang J; Li J; Zhang Y; Liu F; El-Omar E; Han L; Bian J; Gong L; Wang M, 2022, 'Ferulic acid attenuates high-fat diet-induced hypercholesterolemia by activating classic bile acid synthesis pathway', Frontiers in Nutrition, 9,

Gemikonakli G; Mach J; Zhang F; Bullock M; Tran T; El-Omar E; Hilmer SN, 2022, 'Polypharmacy with high Drug Burden Index (DBI) alters the gut microbiome overriding aging effects and is reversible with deprescribing.', The Journals of Gerontology Series A, 78,

Huang YE; Shen X; Yin D; Lan S; Lu Y; Zhou P; Ma L; Zhang Y; Sheng Y; Zhang Y; Li M; Hu F; Chen J; Li P; El-Omar EM; Zheng H, 2022, 'Disrupted establishment of anaerobe and facultative anaerobe balance in preterm infants with extrauterine growth restriction', Frontiers in Pediatrics, 10,

Malfertheiner P; Megraud F; Rokkas T; Gisbert JP; Liou JM; Schulz C; Gasbarrini A; Hunt RH; Leja M; O’Morain C; Rugge M; Suerbaum S; Tilg H; Sugano K; El-Omar EM; Agreus L; Bazzoli F; Bordin D; Loginov AS; Mario FD; Dinis-Ribeiro M; Engstrand L; Fallone C; Goh KL; Graham D; Kuipers EJ; Kupcinskas J; Lanas A; Machado JC; Mahachai V; Marshall BJ; Milosavljevic T; Moss SF; Park JY; Niv Y; Rajilic-Stojanovic M; Ristimaki A; Smith S; Tepes B; Wu CY; Zhou L, 2022, 'Management of Helicobacter pylori infection: the Maastricht VI/Florence consensus report', Gut, 71, pp. 1724 - 1762,

Sugano K; Spechler SJ; El-Omar EM; McColl KEL; Takubo K; Gotoda T; Fujishiro M; Iijima K; Inoue H; Kawai T; Kinoshita Y; Miwa H; Mukaisho KI; Murakami K; Seto Y; Tajiri H; Bhatia S; Choi MG; Fitzgerald RC; Fock KM; Goh KL; Ho KY; Mahachai V; O'Donovan M; Odze R; Peek R; Rugge M; Sharma P; Sollano JD; Vieth M; Wu J; Wu MS; Zou D; Kaminishi M; Malfertheiner P, 2022, 'Kyoto international consensus report on anatomy, pathophysiology and clinical significance of the gastro-oesophageal junction', Gut, 71, pp. 1488 - 1514,

Chen J; Zhao Y; Zhang F; Li J; Boland JA; Cheng NC; Liu K; Tiffen JC; Bertolino P; Bowen DG; Krueger A; Lisowski L; Alexander IE; Vadas MA; El-Omar E; Gamble JR; McCaughan GW, 2022, 'Liver-specific deletion of miR-181ab1 reduces liver tumour progression via upregulation of CBX7', Cellular and Molecular Life Sciences, 79,

Siau K; Kulkarni AV; El-Omar E, 2022, 'How to be a Good Reviewer for a Scientific Journal', Journal of Clinical and Experimental Hepatology, 12, pp. 1238 - 1243,

Mittinty MM; Lee JY; Walton DM; El-Omar EM; Elliott JM, 2022, 'Integrating the Gut Microbiome and Stress-Diathesis to Explore Post-Trauma Recovery: An Updated Model', Pathogens, 11,

Dong Y; Wu X; Han L; Bian J; He C; El-Omar E; Gong L; Wang M, 2022, 'The Potential Roles of Dietary Anthocyanins in Inhibiting Vascular Endothelial Cell Senescence and Preventing Cardiovascular Diseases', Nutrients, 14,

Li K; Xiao Y; Bian J; Han L; He C; El-Omar E; Gong L; Wang M, 2022, 'Ameliorative Effects of Gut Microbial Metabolite Urolithin A on Pancreatic Diseases', Nutrients, 14,

El-Omar EM, 2022, 'Genetic Predisposition for Helicobacter pylori Infection—The Jury Is Still Out!', Gastroenterology, 162, pp. 1591 - 1593,

Xiao Y; Li K; Bian J; Liu H; Zhai X; El-Omar E; Han L; Gong L; Wang M, 2022, 'Urolithin A Attenuates Diabetes-Associated Cognitive Impairment by Ameliorating Intestinal Barrier Dysfunction via N-glycan Biosynthesis Pathway', Molecular Nutrition and Food Research, 66,

Li Y; Zhang F; Zheng H; Kalasabail S; Hicks C; Fung KY; Preaudet A; Putoczki T; Beretov J; Millar EKA; El-Omar E; Jiang XT; Yim HCH, 2022, 'Fecal DNA Virome Is Associated with the Development of Colorectal Neoplasia in a Murine Model of Colorectal Cancer', Pathogens, 11,

Susic DF; Wang L; Roberts LM; Bai M; Gia A; McGovern E; Jiang XT; Davis GK; El-Omar E; Henry A, 2022, 'Corrigendum: The P4 Study: Postpartum Maternal and Infant Faecal Microbiome 6 Months After Hypertensive Versus Normotensive Pregnancy(Front. Cell. Infect. Microbiol., (2022), 12, (646165), 10.3389/fcimb.2022.646165)', Frontiers in Cellular and Infection Microbiology, 12,

Zhang N; Wang Z; Lv J; Zhang S; Liu Y; Liu T; Li W; Gong L; Zhang X; El-Omar EM; Lu W, 2022, 'Characterization of Gut Microbiota and Exploration of Potential Predictive Model for Hepatocellular Carcinoma Microvascular Invasion', Frontiers in Medicine, 9,

Amorim N; McGovern E; Raposo A; Khatiwada S; Shen S; Koentgen S; Hold G; Behary J; El-Omar E; Zekry A, 2022, 'Refining a Protocol for Faecal Microbiota Engraftment in Animal Models After Successful Antibiotic-Induced Gut Decontamination', Frontiers in Medicine, 9,

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