By Professor Emad El-Omar

Journal articles

Watt E; Gemmell MR; Berry S; Glaire M; Farquharson F; Louis P; Murray GI; El-Omar E; Hold GL, 2016, 'Extending colonic mucosal microbiome analysis-assessment of colonic lavage as a proxy for endoscopic colonic biopsies', Microbiome, 4, pp. 61, http://dx.doi.org/10.1186/s40168-016-0207-9

Liou JM; Fang YJ; Chen CC; Bair MJ; Chang CY; Lee YC; Chen MJ; Chen CC; Tseng CH; Hsu YC; Lee JY; Yang TH; Luo JC; Chang CC; Chen CY; Chen PY; Shun CT; Hsu WF; Hu WH; Chen YN; Sheu BS; Lin JT; Wu JY; El-Omar EM; Wu MS, 2016, 'Concomitant, bismuth quadruple, and 14-day triple therapy in the first-line treatment of Helicobacter pylori: a multicentre, open-label, randomised trial', The Lancet, 388, pp. 2355 - 2365, http://dx.doi.org/10.1016/S0140-6736(16)31409-X

Mukhopadhya I; Murray GI; Duncan L; Yuecel R; Shattock R; Kelly C; Iannelli F; Pozzi G; El-Omar EM; Hold GL; Hijazi K, 2016, 'Transporters for antiretroviral drugs in colorectal CD4+ T cells and circulating α4β7 integrin CD4+ T cells: Implications for HIV microbicides', Molecular Pharmaceutics, 13, pp. 3334 - 3340, http://dx.doi.org/10.1021/acs.molpharmaceut.6b00351

Omary MB; Cohen DE; El-Omar EM; Jalan R; Low MJ; Nathanson MH; Peek RM; Turner JR, 2016, 'Not All Mice Are the Same: Standardization of Animal Research Data Presentation', Cellular and Molecular Gastroenterology and Hepatology, 2, pp. 391 - 393, http://dx.doi.org/10.1016/j.jcmgh.2016.04.001

Omary MB; Cohen DE; El-Omar EM; Jalan R; Low MJ; Nathanson MH; Peek RM; Turner JR, 2016, 'Not all mice are the same: Standardization of animal research data presentation', Hepatology, 63, pp. 1752 - 1754, http://dx.doi.org/10.1002/hep.28608

Omary MB; Cohen DE; El-Omar EM; Jalan R; Low MJ; Nathanson MH; Peek RM; Turner JR, 2016, 'Not All Mice Are the Same: Standardization of Animal Research Data Presentation', Gastroenterology, 150, pp. 1503 - 1504, http://dx.doi.org/10.1053/j.gastro.2016.03.034

Omary MB; Cohen DE; El-Omar E; Jalan R; Low M; Nathanson M; Peek R; Turner J, 2016, 'Not all mice are the same: Standardization of animal research data presentation', Gut, 65, pp. 894 - 895, http://dx.doi.org/10.1136/gutjnl-2016-312041

Omary MB; Cohen DE; El-Omar EM; Jalan R; Low MJ; Nathanson MH; Peek RM; Turner JR, 2016, 'Not all mice are the same: Standardization of animal research data presentation References', Journal of Hepatology, 64, pp. 1203 - 1205, http://dx.doi.org/10.1016/j.jhep.2016.04.007

Mukhopadhya I; Murray GI; Berry S; Thomson J; Frank B; Gwozdz G; Ekeruche-Makinde J; Shattock R; Kelly C; Iannelli F; Pozzi G; El-Omar EM; Hold GL; Hijazi K, 2016, 'Drug transporter gene expression in human colorectal tissue and cell lines: Modulation with antiretrovirals for microbicide optimization', Journal of Antimicrobial Chemotherapy, 71, pp. 372 - 386, http://dx.doi.org/10.1093/jac/dkv335

Porter R; Murray R; Petty R; El-Omar EM; Hold GL; McLean MH, 2016, 'PTU-154 HMGB1 As a Prognostic Biomarker in The Progression of Barrett’s Oesophagus', Gut, 65, pp. A133.1 - A133, http://dx.doi.org/10.1136/gutjnl-2016-312388.239

Hunt RH; Camilleri M; Crowe SE; El-Omar EM; Fox JG; Kuipers EJ; Malfertheiner P; McColl KEL; Pritchard DM; Rugge M; Sonnenberg A; Sugano K; Tack J, 2015, 'The stomach in health and disease', Gut, http://dx.doi.org/10.1136/gutjnl-2014-307595

Sugano K; Tack J; Kuipers EJ; Graham DY; El-Omar EM; Miura S; Haruma K; Asaka M; Uemura N; Malfertheiner P; Azuma T; Bazzoli F; Chan FKL; Chen M; Chiba N; Chiba T; Vas Coelho LG; Di Mario F; Fock KM; Fukuda Y; Genta RM; Goh KL; Katelaris PH; Kato M; Kawai T; Kushima R; Mahachai V; Matsuhisa T; Miwa H; Murakami K; O'Morain CA; Rugge M; Sato K; Shimoyama T; Sugiyama T; Suzuki H; Yagi K; Wu MS; Ito M; Kim N; Furuta T; Mégraud F; Shiotani A; Kamada T, 2015, 'Kyoto global consensus report on Helicobacter pylori gastritis', Gut, 64, pp. 1353 - 1367, http://dx.doi.org/10.1136/gutjnl-2015-309252

Basavaraju U; Shebl FM; Palmer AJ; Berry S; Hold GL; El-Omar EM; Rabkin CS, 2015, 'Cytokine gene polymorphisms, cytokine levels and the risk of colorectal neoplasia in a screened population of Northeast Scotland', European Journal of Cancer Prevention, 24, pp. 296 - 304, http://dx.doi.org/10.1097/CEJ.0000000000000087

Bennett C; Moayyedi P; Corley DA; DeCaestecker J; Falck-Ytter Y; Falk G; Vakil N; Sanders S; Vieth M; Inadomi J; Aldulaimi D; Ho K-Y; Odze R; Meltzer SJ; Quigley E; Gittens S; Watson P; Zaninotto G; Iyer PG; Alexandre L; Ang Y; Callaghan J; Harrison R; Singh R; Bhandari P; Bisschops R; Geramizadeh B; Kaye P; Krishnadath S; Fennerty MB; Manner H; Nason KS; Pech O; Konda V; Ragunath K; Rahman I; Romero Y; Sampliner R; Siersema PD; Tack J; Tham TCK; Trudgill N; Weinberg DS; Wang J; Wang K; Wong JYY; Attwood S; Malfertheiner P; MacDonald D; Barr H; Ferguson MK; Jankowski J, 2015, 'BOB CAT: A Large-Scale Review and Delphi Consensus for Management of Barrett's Esophagus With No Dysplasia, Indefinite for, or Low-Grade Dysplasia', AMERICAN JOURNAL OF GASTROENTEROLOGY, 110, pp. 662 - 682, http://dx.doi.org/10.1038/ajg.2015.55

Mukhopadhya I; Hansen R; Meharg C; Thomson JM; Russell RK; Berry SH; El-Omar EM; Hold GL, 2015, 'The fungal microbiota of de-novo paediatric inflammatory bowel disease', Microbes and Infection, 17, pp. 304 - 310, http://dx.doi.org/10.1016/j.micinf.2014.12.001

Omary MB; Wallace MB; El-Omar EM; Jalan R; Nathanson MH, 2015, 'A multi-journal partnership to highlight joint first-authors of manuscripts', Gastroenterology, 148, pp. 274 - 275, http://dx.doi.org/10.1053/j.gastro.2014.11.001

Omary MB; Wallace MB; El-Omar EM; Jalan R; Nathanson MH, 2015, 'A multi-journal partnership to highlight joint first-authors of manuscripts', Gastrointestinal Endoscopy, 81, pp. 437 - 438, http://dx.doi.org/10.1016/j.gie.2014.12.006

Omary MB; Wallace MB; El-Omar EM; Jalan R; Nathanson MH, 2015, 'A multi-journal partnership to highlight joint first-authors of manuscripts', Hepatology, 61, pp. 416 - 417, http://dx.doi.org/10.1002/hep.27631

Omary MB; Wallace MB; El-Omar EM; Jalan R; Nathanson MH, 2015, 'A multi-journal partnership to highlight joint first-authors of manuscripts', Journal of Hepatology, 62, pp. 255 - 256, http://dx.doi.org/10.1016/j.jhep.2014.11.022

Omary MB; Wallace MB; El-Omar EM; Jalan R; Nathanson MH, 2015, 'A multi-journal partnership to highlight joint first-authors of manuscripts', Gut, 64, pp. 189, http://dx.doi.org/10.1136/gutjnl-2014-308880

Pachathundikandi SK; Lind J; Tegtmeyer N; El-Omar EM; Backert S, 2015, 'Interplay of the gastric pathogen helicobacter pylori with toll-like receptors', BioMed Research International, 2015, pp. 192420, http://dx.doi.org/10.1155/2015/192420

Connors J; Hansen R; Dunn KA; Langille MG; Russell RK; Otley AR; MacIntyre B; El-Omar E; Bielawski JP; Hold GL; Van Limbergen J, 2015, '169 Assessment of Community Structure and Predictive Functional Profiling of the Mucosa-Associated Microbiome Implicates Alterations in Benzoate Metabolism in ‘de novo’ IBD After Pouch-Surgery and in Treatment-Naïve Pediatric IBD', Gastroenterology, 148, pp. S - 45, http://dx.doi.org/10.1016/s0016-5085(15)30158-x

McLean MH; El-Omar EM, 2014, 'Genetics of gastric cancer', Nature Reviews Gastroenterology and Hepatology, 11, pp. 664 - 674, http://dx.doi.org/10.1038/nrgastro.2014.143

Hold GL; Berry S; Saunders KA; Drew J; Mayer C; Brookes H; Gay NJ; El-Omar EM; Bryant CE, 2014, 'The TLR4 D299G and T399I SNPs are constitutively active to up-regulate expression of Trif-dependent genes', PLoS ONE, 9, pp. e111460, http://dx.doi.org/10.1371/journal.pone.0111460

Mactier KE; Glaire MA; Basavaraju U; El-Omar EM; Hold GL, 2014, 'MicroRNAs in gastrointestinal malignancy: A tool in cancer prevention?', European Journal of Cancer Prevention, 23, pp. 540 - 549, http://dx.doi.org/10.1097/CEJ.0000000000000014

Adams AT; Kennedy NA; Hansen R; Ventham NT; O'Leary KR; Drummond HE; Noble CL; El-Omar E; Russell RK; Wilson DC; Nimmo ER; Hold GL; Satsangi J, 2014, 'Two-stage genome-wide methylation profiling in childhood-onset Crohn's disease implicates epigenetic alterations at the VMP1/MIR21 and HLA loci', Inflammatory Bowel Diseases, 20, pp. 1784 - 1793, http://dx.doi.org/10.1097/MIB.0000000000000179

Hold GL; Smith M; Grange C; Watt ER; El-Omar EM; Mukhopadhya I, 2014, 'Role of the gut microbiota in inflammatory bowel disease pathogenesis: What have we learnt in the past 10 years?', World Journal of Gastroenterology, 20, pp. 1192 - 1210, http://dx.doi.org/10.3748/wjg.v20.i5.1192

Kennedy NA; Adams AT; Hansen R; Ventham NT; O'Leary KR; Drummond H; Noble CL; El-Omar E; Russell RK; Wilson DC; Nimmo ER; Hold GL; Satsangi J, 2014, 'Epigenome-wide analysis in childhood-onset Crohn's disease implicates MIR21 in pathogenesis and identifies multiple methylation-based diagnostic biomarkers', JOURNAL OF CROHNS & COLITIS, 8, pp. S19 - S19, http://dx.doi.org/10.1016/S1873-9946(14)60035-0

Folmer F; Basavaraju U; Jaspars M; Hold G; El-Omar E; Dicato M; Diederich M, 2014, 'Anticancer effects of bioactive berry compounds', Phytochemistry Reviews, 13, pp. 295 - 322, http://dx.doi.org/10.1007/s11101-013-9319-z

El-Omar E; Gerbes A; Grady W; Rösch T, 2014, 'Highlights from this issue', Gut, 63, http://dx.doi.org/10.1136/gutjnl-2014-307028

Lochhead PJ; Mayer C-D; Hold GL; El-Omar E, 2014, '946 Genome-Wide Analysis of DNA Methylation in Low-Grade Colorectal Adenomas and Normal Colonic Mucosa', Gastroenterology, 146, pp. S - 165, http://dx.doi.org/10.1016/s0016-5085(14)60588-6

El-Omar E; Gerbes A; Grady W, 2014, 'Highlights from this issue', Gut, 63, pp. i - ii, http://dx.doi.org/10.1136/gutjnl-2014-308035

El-Omar E; Gerbes A; Grady W; Rösch T, 2014, 'Highlights from this issue', Gut, 63, pp. i - ii, http://dx.doi.org/10.1136/gutjnl-2013-306458

El-Omar E; Gerbes A; Grady W; Rösch T, 2014, 'Highlights from this issue', Gut, 63, pp. i - ii, http://dx.doi.org/10.1136/gutjnl-2014-307215

El-Omar E; Gerbes A; Grady W; Rösch T, 2014, 'Highlights from this issue', Gut, 63, pp. i - ii, http://dx.doi.org/10.1136/gutjnl-2014-306794

El-Omar E; Gerbes A; Grady W; Rösch T, 2014, 'Highlights from this issue', Gut, 63, pp. i - ii, http://dx.doi.org/10.1136/gutjnl-2014-307700

El-Omar E; Gerbes A; Grady W; Rösch T, 2014, 'Highlights from this issue', Gut, 63, pp. i - ii, http://dx.doi.org/10.1136/gutjnl-2014-307830

El‐Omar EM, 2014, 'How to publish a scientific manuscript in a high‐impact journal', Advances in Digestive Medicine, 1, pp. 105 - 109, http://dx.doi.org/10.1016/j.aidm.2014.07.004

Kostic AD; Chun E; Robertson L; Glickman JN; Gallini CA; Michaud M; Clancy TE; Chung DC; Lochhead P; Hold GL; El-Omar EM; Brenner D; Fuchs CS; Meyerson M; Garrett WS, 2013, 'Fusobacterium nucleatum Potentiates Intestinal Tumorigenesis and Modulates the Tumor-Immune Microenvironment', Cell Host and Microbe, 14, pp. 207 - 215, http://dx.doi.org/10.1016/j.chom.2013.07.007

Faria R; Bojke L; Epstein D; Corbacho B; Sculpher M, 2013, 'Cost-effectiveness of laparoscopic fundoplication versus continued medical management for the treatment of gastro-oesophageal reflux disease based on long-term follow-up of the REFLUX trial', BRITISH JOURNAL OF SURGERY, 100, pp. 1205 - 1213, http://dx.doi.org/10.1002/bjs.9190

McLean MH; Thomson AJ; Murray GI; Fyfe N; Hold GL; El-Omar EM, 2013, 'Expression of neutrophil gelatinase-associated lipocalin in colorectal neoplastic progression: A marker of malignant potential?', British Journal of Cancer, 108, pp. 2537 - 2541, http://dx.doi.org/10.1038/bjc.2013.264

Grant AM; Boachie C; Cotton SC; Faria R; Bojke L; Epstein DM; Ramsay CR; Corbacho B; Sculpher M; Krukowski ZH; Heading RC; Campbell MK, 2013, 'Clinical and economic evaluation of laparoscopic surgery compared with medical management for gastro-oesophageal reflux disease: 5-year follow-up of multicentre randomised trial (the REFLUX trial)', HEALTH TECHNOLOGY ASSESSMENT, 17, pp. 1 - +, http://dx.doi.org/10.3310/hta17220

El-Omar EM, 2013, 'Helicobacter pylori susceptibility in the GWAS era', JAMA, 309, pp. 1939 - 1940, http://dx.doi.org/10.1001/jama.2013.5590

Grant AM; Cotton SC; Boachie C; Ramsay CR; Krukowski ZH; Heading RC; Campbell MK, 2013, 'Minimal access surgery compared with medical management for gastro-oesophageal reflux disease: five year follow-up of a randomised controlled trial (REFLUX)', BMJ-BRITISH MEDICAL JOURNAL, 346, http://dx.doi.org/10.1136/bmj.f1908

El-Omar E; Grady W; Gerbes A, 2013, 'Highlights from this issue', Gut, 62, http://dx.doi.org/10.1136/gutjnl-2013-304710

Hansen R; Berry SH; Mukhopadhya I; Thomson JM; Saunders KA; Nicholl CE; Bisset WM; Loganathan S; Mahdi G; Kastner-Cole D; Barclay AR; Bishop J; Flynn DM; McGrogan P; Russell RK; El-Omar EM; Hold GL, 2013, 'The Microaerophilic Microbiota of De-Novo Paediatric Inflammatory Bowel Disease: The BISCUIT Study', PLoS ONE, 8, pp. e58825, http://dx.doi.org/10.1371/journal.pone.0058825

Rice SA; Woo PN; El-Omar E; Keenan RA; Ormerod AD, 2013, 'Topical tacrolimus 0.1% ointment for treatment of cutaneous Crohn's Disease', BMC Research Notes, 6, pp. 19, http://dx.doi.org/10.1186/1756-0500-6-19

El-Omar EM, 2013, 'Iron deficiency and Helicobacter pylori-induced gastric cancer: Too little, too bad', Journal of Clinical Investigation, 123, pp. 113 - 114, http://dx.doi.org/10.1172/JCI67200

Gress TM; El-Omar EM, 2013, 'Revision of the Atlanta classification of acute pancreatitis: The editorial perspective', Gut, 62, pp. 1, http://dx.doi.org/10.1136/gutjnl-2012-304051

El-Omar E, 2013, 'Update from EIC 2013.', Gut, 62, pp. 1233, http://dx.doi.org/10.1136/gutjnl-2013-305727

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