Select Publications

Journal articles

Chatterton Z; Lamichhane P; Ahmadi Rastegar D; Fitzpatrick L; Lebhar H; Marquis C; Halliday G; Kwok JB, 2023, 'Single-cell DNA methylation sequencing by combinatorial indexing and enzymatic DNA methylation conversion', Cell and Bioscience, vol. 13, http://dx.doi.org/10.1186/s13578-022-00938-9

Nelson PT; Lee EB; Cykowski MD; Alafuzoff I; Arfanakis K; Attems J; Brayne C; Corrada MM; Dugger BN; Flanagan ME; Ghetti B; Grinberg LT; Grossman M; Grothe MJ; Halliday GM; Hasegawa M; Hokkanen SRK; Hunter S; Jellinger K; Kawas CH; Keene CD; Kouri N; Kovacs GG; Leverenz JB; Latimer CS; Mackenzie IR; Mao Q; McAleese KE; Merrick R; Montine TJ; Murray ME; Myllykangas L; Nag S; Neltner JH; Newell KL; Rissman RA; Saito Y; Sajjadi SA; Schwetye KE; Teich AF; Thal DR; Tomé SO; Troncoso JC; Wang SHJ; White CL; Wisniewski T; Yang HS; Schneider JA; Dickson DW; Neumann M, 2023, 'LATE-NC staging in routine neuropathologic diagnosis: an update', Acta Neuropathologica, vol. 145, pp. 159 - 173, http://dx.doi.org/10.1007/s00401-022-02524-2

Fu YH; Zhou L; Li H; Hsiao J; Li B; Tanglay O; Auwyang AD; Wang E; Feng J; Kim WS; Liu J; Halliday GM, 2023, 'Correction to: Adaptive structural changes in the motor cortex and white matter in Parkinson’s disease (Acta Neuropathologica, (2022), 144, 5, (861-879), 10.1007/s00401-022-02488-3)', Acta Neuropathologica, vol. 145, pp. 157, http://dx.doi.org/10.1007/s00401-022-02523-3

Phan K; He Y; Bhatia S; Pickford R; McDonald G; Mazumder S; Timmins HC; Hodges JR; Piguet O; Dzamko N; Halliday GM; Kiernan MC; Kim WS, 2022, 'Multiple pathways of lipid dysregulation in amyotrophic lateral sclerosis', BRAIN COMMUNICATIONS, vol. 5, http://dx.doi.org/10.1093/braincomms/fcac340

Mazumder S; McCann H; D'Silva S; Furlong S; Shepherd CE; Kril JJ; Halliday GM; Rowe DB; Kiernan MC; Tan RH, 2022, 'Riluzole is associated with decreasing neuritic plaque severity in amyotrophic lateral sclerosis.', Brain, http://dx.doi.org/10.1093/brain/awac467

Tse NY; Bocchetta M; Todd EG; Devenney EM; Tu S; Caga J; Hodges JR; Halliday GM; Irish M; Kiernan MC; Piguet O; Rohrer JD; Ahmed RM, 2022, 'Distinct hypothalamic involvement in the amyotrophic lateral sclerosis-frontotemporal dementia spectrum.', Neuroimage Clin, vol. 37, pp. 103281, http://dx.doi.org/10.1016/j.nicl.2022.103281

Matar E; Ehgoetz Martens KA; Phillips JR; Wainstein G; Halliday GM; Lewis SJG; Shine JM, 2022, 'Dynamic network impairments underlie cognitive fluctuations in Lewy body dementia', npj Parkinson's Disease, vol. 8, pp. 16, http://dx.doi.org/10.1038/s41531-022-00279-x

Ahmadi Rastegar D; Hughes LP; Perera G; Keshiya S; Zhong S; Gao J; Halliday GM; Schüle B; Dzamko N, 2022, 'Effect of LRRK2 protein and activity on stimulated cytokines in human monocytes and macrophages', npj Parkinson's Disease, vol. 8, pp. 34, http://dx.doi.org/10.1038/s41531-022-00297-9

Phillips JR; Matar E; Ehgoetz Martens KA; Moustafa AA; Halliday GM; Lewis SJG, 2022, 'Exploring the Sensitivity of Prodromal Dementia with Lewy Bodies Research Criteria', Brain Sciences, vol. 12, pp. 1594 - 1594, http://dx.doi.org/10.3390/brainsci12121594

Bitar M; Weissleder C; North HF; Clearwater MS; Zalucki O; Halliday GM; Webster MJ; Piper M; Weickert CS; Barry G, 2022, 'Identifying gene expression profiles associated with neurogenesis and inflammation in the human subependymal zone from development through aging', Scientific Reports, vol. 12, pp. 40, http://dx.doi.org/10.1038/s41598-021-03976-4

Fu YH; He Y; Phan K; Bhatia S; Pickford R; Wu P; Dzamko N; Halliday GM; Kim WS, 2022, 'Increased unsaturated lipids underlie lipid peroxidation in synucleinopathy brain', Acta Neuropathologica Communications, vol. 10, http://dx.doi.org/10.1186/s40478-022-01469-7

Poewe W; Stankovic I; Halliday G; Meissner WG; Wenning GK; Pellecchia MT; Seppi K; Palma JA; Kaufmann H, 2022, 'Multiple system atrophy', Nature Reviews Disease Primers, vol. 8, pp. 56, http://dx.doi.org/10.1038/s41572-022-00382-6

Mazumder S; Kiernan MC; Halliday GM; Timmins HC; Mahoney CJ, 2022, 'The contribution of brain banks to knowledge discovery in amyotrophic lateral sclerosis: A systematic review', Neuropathology and Applied Neurobiology, vol. 48, pp. e12845, http://dx.doi.org/10.1111/nan.12845

Fu YH; Zhou L; Li H; Hsiao JHT; Li B; Tanglay O; Auwyang AD; Wang E; Feng J; Kim WS; Liu J; Halliday GM, 2022, 'Adaptive structural changes in the motor cortex and white matter in Parkinson’s disease', Acta Neuropathologica, vol. 144, pp. 861 - 879, http://dx.doi.org/10.1007/s00401-022-02488-3

Katzeff JS; Lok HC; Bhatia S; Fu YH; Halliday GM; Kim WS, 2022, 'ATP-binding cassette transporter expression is widely dysregulated in frontotemporal dementia with TDP-43 inclusions', Frontiers in Molecular Neuroscience, vol. 15, http://dx.doi.org/10.3389/fnmol.2022.1043127

Hopfner F; Tietz AK; Ruf VC; Ross OA; Koga S; Dickson D; Aguzzi A; Attems J; Beach T; Beller A; Cheshire WP; van Deerlin V; Desplats P; Deuschl G; Duyckaerts C; Ellinghaus D; Evsyukov V; Flanagan ME; Franke A; Frosch MP; Gearing M; Gelpi E; van Gerpen JA; Ghetti B; Glass JD; Grinberg LT; Halliday G; Helbig I; Höllerhage M; Huitinga I; Irwin DJ; Keene DC; Kovacs GG; Lee EB; Levin J; Martí MJ; Mackenzie I; McKeith I; Mclean C; Mollenhauer B; Neumann M; Newell KL; Pantelyat A; Pendziwiat M; Peters A; Molina Porcel L; Rabano A; Matěj R; Rajput A; Rajput A; Reimann R; Scott WK; Seeley W; Selvackadunco S; Simuni T; Stadelmann C; Svenningsson P; Thomas A; Trenkwalder C; Troakes C; Trojanowski JQ; Uitti RJ; White CL; Wszolek ZK; Xie T; Ximelis T; Yebenes J; Müller U; Schellenberg GD; Herms J; Kuhlenbäumer G; Höglinger G, 2022, 'Common Variants Near ZIC1 and ZIC4 in Autopsy-Confirmed Multiple System Atrophy', Movement Disorders, vol. 37, pp. 2110 - 2121, http://dx.doi.org/10.1002/mds.29164

Trist BG; Genoud S; Roudeau S; Rookyard A; Abdeen A; Cottam V; Hare DJ; White M; Altvater J; Fifita JA; Hogan A; Grima N; Blair IP; Kysenius K; Crouch PJ; Carmona A; Rufin Y; Claverol S; Van Malderen S; Falkenberg G; Paterson DJ; Smith B; Troakes C; Vance C; Shaw CE; Al-Sarraj S; Cordwell S; Halliday G; Ortega R; Double KL, 2022, 'Altered SOD1 maturation and post-translational modification in amyotrophic lateral sclerosis spinal cord', Brain : a journal of neurology, vol. 145, pp. 3108 - 3130, http://dx.doi.org/10.1093/brain/awac165

Chedid J; Labrador-Garrido A; Zhong S; Gao J; Zhao Y; Perera G; Kim WS; Halliday GM; Dzamko N, 2022, 'A small molecule toll-like receptor antagonist rescues α-synuclein fibril pathology', Journal of Biological Chemistry, vol. 298, pp. 102260, http://dx.doi.org/10.1016/j.jbc.2022.102260

Johnson EG; Kuiper W; Ahmed RM; Halliday GM; Burrell JR; Hodges JR; Guastella AJ; Piguet O; Kumfor F, 2022, 'Plasma Oxytocin Is Not Associated with Social Cognition or Behavior in Frontotemporal Dementia and Alzheimer's Disease Syndromes', Dementia and Geriatric Cognitive Disorders, vol. 51, pp. 241 - 248, http://dx.doi.org/10.1159/000525087

Tse NY; Tu S; Chen Y; Caga J; Dobson-Stone C; Kwok JB; Halliday GM; Ahmed RM; Hodges JR; Piguet O; Kiernan MC; Devenney EM, 2022, 'Schizotypal traits across the amyotrophic lateral sclerosis–frontotemporal dementia spectrum: pathomechanistic insights', Journal of Neurology, vol. 269, pp. 4241 - 4252, http://dx.doi.org/10.1007/s00415-022-11049-3

Foxe D; Hu A; Cheung SC; Ahmed RM; Cordato NJ; Devenney E; Hwang YT; Halliday GM; Mueller N; Leyton CE; Hodges JR; Burrell JR; Irish M; Piguet O, 2022, 'Utility of the Addenbrooke's Cognitive Examination III online calculator to differentiate the primary progressive aphasia variants', BRAIN COMMUNICATIONS, vol. 4, http://dx.doi.org/10.1093/braincomms/fcac161

Phillips JR; Matar E; Ehgoetz Martens KA; Moustafa AA; Halliday GM; Lewis SJG, 2022, 'An Adaptive Measure of Visuospatial Impairment in Dementia with Lewy Bodies', Movement Disorders Clinical Practice, vol. 9, pp. 619 - 627, http://dx.doi.org/10.1002/mdc3.13488

Weiss F; Labrador-Garrido A; Dzamko N; Halliday G, 2022, 'Immune responses in the Parkinson's disease brain', Neurobiology of Disease, vol. 168, http://dx.doi.org/10.1016/j.nbd.2022.105700

Wenning GK; Stankovic I; Vignatelli L; Fanciulli A; Calandra-Buonaura G; Seppi K; Palma JA; Meissner WG; Krismer F; Berg D; Cortelli P; Freeman R; Halliday G; Höglinger G; Lang A; Ling H; Litvan I; Low P; Miki Y; Panicker J; Pellecchia MT; Quinn N; Sakakibara R; Stamelou M; Tolosa E; Tsuji S; Warner T; Poewe W; Kaufmann H, 2022, 'The Movement Disorder Society Criteria for the Diagnosis of Multiple System Atrophy', Movement Disorders, vol. 37, pp. 1131 - 1148, http://dx.doi.org/10.1002/mds.29005

Galper J; Dean NJ; Pickford R; Lewis SJG; Halliday GM; Kim WS; Dzamko N, 2022, 'Lipid pathway dysfunction is prevalent in patients with Parkinson's disease', BRAIN, vol. 145, pp. 3472 - 3487, http://dx.doi.org/10.1093/brain/awac176

Katzeff JS; Bright F; Phan K; Kril JJ; Ittner LM; Kassiou M; Hodges JR; Piguet O; Kiernan MC; Halliday GM; Kim WS, 2022, 'Biomarker discovery and development for frontotemporal dementia and amyotrophic lateral sclerosis', Brain, vol. 145, pp. 1598 - 1609, http://dx.doi.org/10.1093/brain/awac077

Boel JA; de Bie RMA; Schmand BA; Dalrymple-Alford JC; Marras C; Adler CH; Goldman JG; Tröster AI; Burn DJ; Litvan I; Geurtsen GJ; Bernard B; Stebbins G; Filoteo JV; Weintraub D; Caviness JN; Belden C; Zabetian CP; Cholerton BA; Huang X; Eslinger PJ; Leverenz JB; Duff-Canning S; Farrer M; Anderson TJ; Myall DJ; Naismith SL; Lewis SJG; Halliday GM; Wu RM; Williams-Gray CH; Breen DP; Barker RA; Yarnall AJ; Klein M; Mollenhauer B; Trenkwalder C; Kulisevsky J; Pagonabarraga J; Gasca-Salas C; Rodriguez-Oroz MC; Junque C; Segura B; Barone P; Santangelo G; Cammisuli DM; Biundo R; Antonini A; Weis L; Pedersen KF; Alves G, 2022, 'Level I PD-MCI Using Global Cognitive Tests and the Risk for Parkinson's Disease Dementia', Movement Disorders Clinical Practice, vol. 9, pp. 479 - 483, http://dx.doi.org/10.1002/mdc3.13451

Hooshmand K; Halliday GM; Pineda SS; Sutherland GT; Guennewig B, 2022, 'Overlap between Central and Peripheral Transcriptomes in Parkinson’s Disease but Not Alzheimer’s Disease', International Journal of Molecular Sciences, vol. 23, http://dx.doi.org/10.3390/ijms23095200

Chen Y; Landin-Romero R; Kumfor F; Irish M; Dobson-Stone C; Kwok JB; Halliday GM; Hodges JR; Piguet O, 2022, 'Cerebellar integrity and contributions to cognition in C9orf72-mediated frontotemporal dementia', Cortex, vol. 149, pp. 73 - 84, http://dx.doi.org/10.1016/j.cortex.2021.12.014

Matar E; Brooks D; Lewis SJG; Halliday GM, 2022, 'Limbic thalamus atrophy is associated with visual hallucinations in Lewy body disorders', Neurobiology of Aging, vol. 112, pp. 122 - 128, http://dx.doi.org/10.1016/j.neurobiolaging.2022.01.001

Stevanovski I; Chintalaphani SR; Gamaarachchi H; Ferguson JM; Pineda SS; Scriba CK; Tchan M; Fung V; Ng K; Cortese A; Houlden H; Dobson-Stone C; Fitzpatrick L; Halliday G; Ravenscroft G; Davis MR; Laing NG; Fellner A; Kennerson M; Kumar KR; Deveson IW, 2022, 'Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing', Science Advances, vol. 8, pp. eabm5386, http://dx.doi.org/10.1126/sciadv.abm5386

Ferreira N; Richner M; van der Laan A; Jul Christiansen IB; Vaegter CB; Nyengaard JR; Halliday GM; Weis J; Giasson BI; Mackenzie IR; Jensen PH; Jan A, 2022, 'Correction: Prodromal neuroinvasion of pathological alpha-synuclein in brainstem reticular nuclei and white matter lesions in a model of alpha-synucleinopathy (vol 3, fcab104, 2021)', BRAIN COMMUNICATIONS, vol. 4, http://dx.doi.org/10.1093/braincomms/fcac067

Bocchetta M; Todd EG; Tse NY; Devenney EM; Tu S; Caga J; Hodges JR; Halliday GM; Irish M; Piguet O; Kiernan MC; Rohrer JD; Ahmed RM, 2022, 'Thalamic and Cerebellar Regional Involvement across the ALS–FTD Spectrum and the Effect of C9orf72', Brain Sciences, vol. 12, pp. 336 - 336, http://dx.doi.org/10.3390/brainsci12030336

Ge P; Yang M; Bouchard JL; Dzamko N; Lewis SJG; Halliday GM; Doran TM, 2022, 'Chemoselective Bioconjugation of Amyloidogenic Protein Antigens to PEGylated Microspheres Enables Detection of α-Synuclein Autoantibodies in Human Plasma', Bioconjugate Chemistry, vol. 33, pp. 301 - 310, http://dx.doi.org/10.1021/acs.bioconjchem.1c00530

Narasimhan M; Schwartz R; Halliday G, 2022, 'Parkinsonism and cerebrovascular disease', Journal of the Neurological Sciences, vol. 433, pp. 120011 - 120011, http://dx.doi.org/10.1016/j.jns.2021.120011

Kumfor F; Liang CT; Hazelton JL; Leyton CE; Kaizik C; Devenney E; Connaughton E; Langdon R; Mioshi E; Kwok JB; Dobson-Stone C; Halliday GM; Piguet O; Hodges JR; Landin-Romero R, 2022, 'Examining the presence and nature of delusions in Alzheimer's disease and frontotemporal dementia syndromes', International Journal of Geriatric Psychiatry, vol. 37, http://dx.doi.org/10.1002/gps.5692

Forrest SL; Kim JH; Crockford DR; Huynh K; Cheong R; Knott S; Kane MA; Ittner LM; Halliday GM; Kril JJ, 2022, 'Distribution Patterns of Astrocyte Populations in the Human Cortex', Neurochemical Research, http://dx.doi.org/10.1007/s11064-022-03700-2

Ehgoetz Martens KA; Matar E; Phillips JR; Shine JM; Grunstein RR; Halliday GM; Lewis SJG, 2022, 'Narrow doorways alter brain connectivity and step patterns in isolated REM sleep behaviour disorder', NeuroImage: Clinical, vol. 33, pp. 102958, http://dx.doi.org/10.1016/j.nicl.2022.102958

Mccann H; Bahar AY; Burkhardt K; Gardner AJ; Halliday GM; Iverson GL; Shepherd CE, 2022, 'Prevalence of chronic traumatic encephalopathy in the Sydney Brain Bank', Brain Communications, vol. 4, http://dx.doi.org/10.1093/braincomms/fcac189

Fu Y; He Y; Phan K; Pickford R; Kim YB; Dzamko N; Halliday GM; Kim WS, 2022, 'Sex-specific lipid dysregulation in the Abca7 knockout mouse brain', Brain Communications, vol. 4, http://dx.doi.org/10.1093/braincomms/fcac120

de Boer SCM; Riedl L; Van der lee SJ; Otto M; Anderl‐Straub S; Landin‐Romero R; Sorrentino F; Fieldhouse JLP; Reus LM; Halliday GM; Galimberti D; Diehl‐Schmid J; Ducharme S; Piguet O; Pijnenburg YAL, 2022, 'Shorter disease duration in females with sporadic frontotemporal dementia', Alzheimer's & Dementia, vol. 18, http://dx.doi.org/10.1002/alz.067557

Gregersen E; Betzer C; Kim WS; Kovacs G; Reimer L; Halliday GM; Thiel S; Jensen PH, 2021, 'Alpha-synuclein activates the classical complement pathway and mediates complement-dependent cell toxicity', Journal of Neuroinflammation, vol. 18, http://dx.doi.org/10.1186/s12974-021-02225-9

Oliveira LMA; Gasser T; Edwards R; Zweckstetter M; Melki R; Stefanis L; Lashuel HA; Sulzer D; Vekrellis K; Halliday GM; Tomlinson JJ; Schlossmacher M; Jensen PH; Schulze-Hentrich J; Riess O; Hirst WD; El-Agnaf O; Mollenhauer B; Lansbury P; Outeiro TF, 2021, 'Alpha-synuclein research: defining strategic moves in the battle against Parkinson’s disease', npj Parkinson's Disease, vol. 7, pp. 65, http://dx.doi.org/10.1038/s41531-021-00203-9

Guennewig B; Lim J; Marshall L; McCorkindale AN; Paasila PJ; Patrick E; Kril JJ; Halliday GM; Cooper AA; Sutherland GT, 2021, 'Author Correction: Defining early changes in Alzheimer’s disease from RNA sequencing of brain regions differentially affected by pathology (Scientific Reports, (2021), 11, 1, (4865), 10.1038/s41598-021-83872-z)', Scientific Reports, vol. 11, http://dx.doi.org/10.1038/s41598-021-97076-y

Aarsland D; Batzu L; Halliday GM; Geurtsen GJ; Ballard C; Ray Chaudhuri K; Weintraub D, 2021, 'Author Correction: Parkinson disease-associated cognitive impairment (Nature Reviews Disease Primers, (2021), 7, 1, (47), 10.1038/s41572-021-00280-3)', Nature Reviews Disease Primers, vol. 7, pp. 53, http://dx.doi.org/10.1038/s41572-021-00292-z

Guennewig B; Lim J; Marshall L; McCorkindale AN; Paasila PJ; Patrick E; Kril JJ; Halliday GM; Cooper AA; Sutherland GT, 2021, 'Defining early changes in Alzheimer’s disease from RNA sequencing of brain regions differentially affected by pathology', Scientific Reports, vol. 11, pp. 4865, http://dx.doi.org/10.1038/s41598-021-83872-z

He Y; Phan K; Bhatia S; Pickford R; Fu YH; Yang Y; Hodges JR; Piguet O; Halliday GM; Kim WS, 2021, 'Increased VLCFA-lipids and ELOVL4 underlie neurodegeneration in frontotemporal dementia', Scientific Reports, vol. 11, http://dx.doi.org/10.1038/s41598-021-00870-x

Gabery S; Ahmed RM; Caga J; Kiernan MC; Halliday GM; Petersén Å, 2021, 'Loss of the metabolism and sleep regulating neuronal populations expressing orexin and oxytocin in the hypothalamus in amyotrophic lateral sclerosis', Neuropathology and Applied Neurobiology, vol. 47, pp. 979 - 989, http://dx.doi.org/10.1111/nan.12709

Nabais MF; Laws SM; Lin T; Vallerga CL; Armstrong NJ; Blair IP; Kwok JB; Mather KA; Mellick GD; Sachdev PS; Wallace L; Henders AK; Zwamborn RAJ; Hop PJ; Lunnon K; Pishva E; Roubroeks JAY; Soininen H; Tsolaki M; Mecocci P; Lovestone S; Kłoszewska I; Vellas B; Furlong S; Garton FC; Henderson RD; Mathers S; McCombe PA; Needham M; Ngo ST; Nicholson G; Pamphlett R; Rowe DB; Steyn FJ; Williams KL; Anderson TJ; Bentley SR; Dalrymple-Alford J; Fowder J; Gratten J; Halliday G; Hickie IB; Kennedy M; Lewis SJG; Montgomery GW; Pearson J; Pitcher TL; Silburn P; Zhang F; Visscher PM; Yang J; Stevenson AJ; Hillary RF; Marioni RE; Harris SE; Deary IJ; Jones AR; Shatunov A; Iacoangeli A; van Rheenen W; van den Berg LH; Shaw PJ; Shaw CE; Morrison KE; Al-Chalabi A; Veldink JH; Hannon E; Mill J; Wray NR; McRae AF, 2021, 'Meta-analysis of genome-wide DNA methylation identifies shared associations across neurodegenerative disorders', Genome Biology, vol. 22, pp. 90, http://dx.doi.org/10.1186/s13059-021-02275-5

Aarsland D; Batzu L; Halliday GM; Geurtsen GJ; Ballard C; Ray Chaudhuri K; Weintraub D, 2021, 'Parkinson disease-associated cognitive impairment', Nature Reviews Disease Primers, vol. 7, pp. 47, http://dx.doi.org/10.1038/s41572-021-00280-3


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