By Professor Miles Davenport

Journal articles

Venturi V; Kedzierska K; Tanaka MM; Turner SJ; Doherty PC; Davenport MP, 2008, 'Method for assessing the similarity between subsets of the T cell receptor repertoire', Journal of Immunological Methods, 329, pp. 67 - 80, http://dx.doi.org/10.1016/j.jim.2007.09.016

Davenport MP; Loh L; Petravic J; Kent SJ, 2008, 'Rates of HIV immune escape and reversion: implications for vaccination', Trends in Microbiology, 16, pp. 561 - 566

Venturi V; Chin HY; Asher TE; Ladell K; Scheinberg P; Bornstein E; van Bockel D; Kelleher AD; Douek DC; Price DA; Davenport MP, 2008, 'TCR beta-chain sharing in human CD8+ T cell responses to cytomegalovirus and EBV', Journal of Immunology, 181, pp. 7853 - 7862

Kedzierska K; Thomas PG; Venturi V; Davenport MP; Doherty PC; Turner SJ; La Gruta NL, 2008, 'Terminal deoxynucleotidyltransferase is required for the establishment of private virus-specific CD8+ TCR repertoires and facilitates optimal CTL responses', Journal of Immunology, 181, pp. 2556 - 2562

Chavez L; Davenport MP; Shiver JW; Tussey LG; Cox KS; Bachinsky M; Wang F; Huang L; Schleif WA; Davies ME; Tang A; Casimiro DR; Perelson AS; Ribeiro RM, 2008, 'The effect of early versus delayed challenge after vaccination in controlling SHIV 89.6P infection', Virology, 381, pp. 75 - 80

Venturi V; Price DA; Douek DC; Davenport MP, 2008, 'The molecular basis for public T-cell responses?', Nature Reviews Immunology, 8, pp. 231 - 238

Venturi V; Chin HY; Price DA; Douek DC; Davenport MP, 2008, 'The Role of Production Frequency in the Sharing of Simian Immunodeficiency Virus-Specific CD8+ TCRs between Macaques', Journal of Immunology, 181, pp. 2597 - 2609

Loh L; Petravic J; Batten CJ; Davenport MP; Kent SJ, 2008, 'Vaccination and timing influence SIV immune escape viral dynamics in vivo', PLoS Pathogens, 4, pp. e12, http://dx.doi.org/10.1371/journal.ppat.0040012

Karlsson AC; Iversen AKN; Chapman JM; de Oliveira T; Spotts G; McMichael AJ; Davenport MP; Hecht FM; Nixon DF, 2007, 'Sequential broadening of CTL responses in early HIV-1 infection is associated with viral escape', Plos One, 2, pp. e225, http://dx.doi.org/10.1371/journal.pone.0000225

Orr Y; Wilson DP; Taylor JM; Bannon PG; Geczy C; Davenport MP; Kritharides L, 2007, 'A kinetic model of bone marrow neutrophil production that characterizes late phenotypic maturation', American Journal of Physiology - Regulatory Integrative and Comparative Physiology, 292, pp. R1707 - R1716

De Rose R; Batten CJ; Smith MZ; Fernandez CS; Peut V; Thomson S; Ramshaw IA; Coupar BE; Boyle DB; Venturi V; Davenport MP; Kent SJ, 2007, 'Comparative efficacy of subtype AE simian-human immunodeficiency virus priming and boosting vaccines in pigtail macaques', Journal of Virology, 81, pp. 292 - 300

Wilson DP; Mattapallil JJ; Lay MD; Zhang L; Roederer M; Davenport MP, 2007, 'Estimating the infectivity of CCR5-tropic simian immunodeficiency virus SIV(mac251) in the gut', Journal of Virology, 81, pp. 8025 - 8029

Loh L; Batten CJ; Petravic J; Davenport MP; Kent SJ, 2007, 'In vivo fitness costs of different Gag CD8 T-cell escape mutant simian-human immunodeficiency viruses for macaques', Journal of Virology, 81, pp. 5418 - 5422

Belz GT; Zhang L; Lay M; Kupresanin F; Davenport MP, 2007, 'Killer T cells regulate antigen presentation for early expansion of memory, but not naive, CD8+ T cell', Proceedings of the National Academy of Sciences of the United States of America, 104, pp. 6341 - 6346

Venturi V; Kedzierska K; Turner SJ; Doherty PC; Davenport MP, 2007, 'Methods for comparing the diversity of samples of the T cell receptor repertoire', Journal of Immunological Methods, 321, pp. 182 - 195

Crough T; Fazou C; Weiss J; Campbell S; Davenport MP; Bell SC; Galbraith A; McNeil K; Khanna R, 2007, 'Symptomatic and asymptomatic viral recrudescence in solid-organ transplant recipients and its relationship with the antigen-specific CD8(+) T-cell response', Journal of Virology, 81, pp. 11538 - 11542

Venturi V; Chin H; Asher T; Ladell K; Scheinberg P; Bornstein E; Van Bockel DJ; Kelleher AD; Douek DC; Price DA; Davenport MP, 2007, 'T cell receptor b-chain sharing in human CD8+ T cell responses to cytomegalovirus and Epstein-Barr virus', Journal of Immunology, 181, pp. 7853 - 7862

Davenport MP; Price DA; Mcmichael AJ, 2007, 'The T cell repertoire in infection and vaccination: implications for control of persistent viruses', Current Opinion in Immunology, 19, pp. 294 - 300

Davenport MP; Ribeiro RM; Zhang L; Wilson DP; Perelson AS, 2007, 'Understanding the mechanisms and limitations of immune control of HIV', Immunological Reviews, 216, pp. 164 - 175

Fernandez CS; Smith MZ; Batten CJ; De Rose R; Reece JC; Rollman E; Venturi V; Davenport MP; Kent SJ, 2007, 'Vaccine-induced T cells control reversion of AIDS virus immune escape mutants', Journal of Virology, 81, pp. 4137 - 4144

van Bockel D; Price DA; Asher TE; Venturi V; Suzuki K; Warton K; Davenport MP; Cooper DA; Douek DC; Kelleher AD, 2007, 'Validation of RNA-based molecular clonotype analysis for virus-specific CD8+ T-cells in formaldehyde-fixed specimens isolated from peripheral blood', Journal of Immunological Methods, 326, pp. 127 - 138, http://dx.doi.org/10.1016/j.jim.2007.07.016

Ribeiro RM; Hazenberg MD; Perelson AS; Davenport MP, 2006, 'Naïve and memory cell turnover as drivers of CCR5-to-CXCR4 tropism switch in human immunodeficiency virus type 1: Implications for therapy', Journal of Virology, 80, pp. 802 - 809, http://dx.doi.org/10.1128/JVI.80.2.802-809.2006

La Gruta NL; Kedzierska K; Pang K; Davenport MP; Chen W; Turner SJ; Doherty PC; Webby R, 2006, 'A virus-specific CD8+ T cell immunodominance hierarchy determined by antigen dose and precursor frequencies', Proceedings of the National Academy of Sciences of the United States of America, 103, pp. 994 - 999

Davenport MP; Venturi V; Kedzierska K; Field K; Turner SJ; Doherty PC, 2006, 'Early establishment of diverse T cell receptor profiles for influenza-specific CD8(+)CD62L(hi) memory T cells', Proceedings of the National Academy of Sciences of the United States of America, 103, pp. 9184 - 9189

Davenport MP; Zhang L; Shiver JW; Casmiro DR; Ribeiro RM; Perelson AS, 2006, 'Influence of peak viral load on the extent of CD4+ T-cell depletion in simian HIV infection', JAIDS: Journal of Acquired Immune Deficiency Syndromes, 41, pp. 259 - 265

Davenport MP; Ribeiro RM; Hazenberg MD; Perelson AS, 2006, 'Naive and memory cell turnover as drivers of CCR5-to-CXCR4 tropism switch in human immunodeficiency virus type 1: implications for therapy', Journal of Virology, 80, pp. 802 - 809

Cromer D; Evans KJ; Schofield L; Davenport MP, 2006, 'Preferential invasion of reticulocytes during late-stage Plasmodium berghei infection accounts for reduced circulating reticulocyte levels.', Int J Parasitol, 36, pp. 1389 - 1397, http://dx.doi.org/10.1016/j.ijpara.2006.07.009

Venturi V; Kedzierska K; Price DA; Doherty PC; Douek DC; Turner SJ; Davenport MP, 2006, 'Sharing of T cell receptors in antigen-specific responses is driven by convergent recombination', Proceedings of the National Academy of Sciences of the United States of America, 103, pp. 18691 - 18696

Davenport MP; Venturi V; Kedzierska K; Price DA; Doherty PC; Douek DC; Turner SJ, 2006, 'Sharing of T cell receptors in antigen-specific responses is driven by convergent recombination', Proceedings of the National Academy of Sciences of the United States of America, 103, pp. 18691 - 18696

La Gruta N; Kedzierska K; Pang K; Webby R; Davenport MP; Chen W; Turner SJ; Doherty P, 2005, 'A virus specific CD8(+) T cell immunodominance hierarchy determined by precursor frequencies and antigen dose', Tissue Antigens, 66, pp. 469 - 470

Crough T; Burrows JM; Fazou C; Walker S; Davenport MP; Khanna R, 2005, 'Contemporaneous fluctuations in T cell responses to persistent herpes virus infections', European Journal of Immunology, 35, pp. 139 - 149

Kedzierska K; La Gruta NL; Davenport MP; Turner SJ; Doherty PC, 2005, 'Contribution of T cell receptor affinity to overall avidity for virus-specific CD8+ T cell responses', Proceedings of the National Academy of Sciences of the United States of America, 102, pp. 11432 - 11437

Fernandez C; Stratov I; De Rose R; Batten J; Smith M; Agy M; Hu SK; Krebs K; Watkins D; O Connor D; Davenport MP; Kent S, 2005, 'Control of T cell escape mutant viruses by effector T cells at transmission: Implications for the requirements of vaccine induced immunity to HIV', Tissue Antigens, 66, pp. 414 - 415

Kedzierska K; La Gruta N; Davenport MP; Turner SJ; Doherty P, 2005, 'Dissection of the high avidity clonotypes in virus-specific CD8+T cells and their dependence on `public` versus `private` nature of the TCR repertoire', Federation of American Societies for Experimantal Biology Journal, 19, pp. A401 - A402

Wilson DP; Zhang L; Ribeiro R; Perelson AS; Davenport MP, 2005, 'Explaining mechanisms behind the virus-specific CD8+T lymphocyte response to a viral infection', Tissue Antigens, 66, pp. 590 - 591

Venturi V; Kedzierska K; Turner SJ; Doherty P; Davenport MP, 2005, 'High degree of sharing of T cell receptor chain sequences in `Private` T cell repertoire', Tissue Antigens, 66, pp. 578 - 578

Davenport MP; Zhang L; Bagchi A; Fridman A; Fu TM; Schleif W; Shiver JW; Ribeiro RM; Perelson AS, 2005, 'High-potency human immunodeficiency virus vaccination leads to delayed and reduced CD8+ T-cell expansion but improved virus control', Journal of Virology, 79, pp. 10059 - 10062

Godkin A; Davenport M; Hill AVS, 2005, 'Molecular analysis of HLA class II associations with hepatitis B virus clearance and vaccine non responsiveness', HEPATOLOGY, 41, pp. 1383 - 1390, http://dx.doi.org/10.1002/hep.20716

Legrand FA; Abadi J; Jordan KA; Davenport MP; Deeks SG; Fennelly GJ; Wiznia AA; Nixon DF; Rosenberg MG, 2005, 'Partial treatment interruption of protease inhibitors augments HIV-specific immune responses in vertically infected pediatric patients', AIDS, 19, pp. 1575 - 1585

Fernandez CS; Stratov I; De Rose R; Walsh K; Dale CJ; Smith MZ; Agy MB; Hu SL; Krebs K; Watkins DI; O Connor DH; Davenport MP; Kent SJ, 2005, 'Rapid viral escape at an immunodominant simian-human immunodeficiency virus cytotoxic T-lymphocyte epitope exacts a dramatic fitness cost', Journal of Virology, 79, pp. 5721 - 5731

Kent SJ; Fernandez CS; Dale CJ; Davenport MP, 2005, 'Reversion of immune escape HIV variants upon transmission: insights into effective viral immunity', Trends in Microbiology, 13, pp. 243 - 246, http://www.sciencedirect.com/science/article/B6TD0-4FTMM26-4/2/e8afbea904702fc224acbe284638f690

Chao DL; Davenport MP; Forrest S; Perelson AS, 2005, 'The effects of thymic selection on the range of T cell cross-reactivity', European Journal of Immunology, 35, pp. 3452 - 3459

Smith MZ; Fernandez CS; Chung A; Dale CJ; De Rose R; Lin J; Brooks AG; Krebs KC; Watkins DI; O Connor DH; Davenport MP; Kent SJ, 2005, 'The pigtail macaque MHC class I allele Mane-A*10 presents an immundominant SIV Gag epitope:identification, tetramer development and implications of immune escape and reversion', Journal of Medical Primatology, 34, pp. 282 - 293

Chao DL; Davenport MP; Forrest S; Perelson AS, 2004, 'A stochastic model of cytotoxic T cell responses', Journal of Theoretical Biology, 228, pp. 227 - 240

Zhang L; Ribeiro RM; Mascola JR; Lewis MG; Stiegler G; Katinger H; Perelson AS; Davenport MP, 2004, 'Effects of antibody on viral kinetics in simian/human immunodeficiency virus infection: implications for vaccination', Journal of Virology, 78, pp. 5520 - 5522

Davenport MP; Ribeiro RM; Perelson AS, 2004, 'Kinetics of virus-specific CD8+ T cells and the control of human immunodeficiency virus infection', Journal of Virology, 78, pp. 10096 - 10103

Chao DL; Davenport MP; Forrest S; Perelson AS, 2004, 'Modelling the impact of antigen kinetics on T-cell activation andresponse', Immunology and Cell Biology, 82, pp. 55 - 61

Davenport MP; Ribeiro RM; Chao DL; Perelson AS, 2004, 'Predicting the impact of a nonsterilizing vaccine against human immunodeficiency virus', Journal of Virology, 78, pp. 11340 - 11351

Chao DL; Davenport MP; Forrest S; Perelson AS, 2003, 'Stochastic stage-structured modeling of the adaptive immune system.', Proceedings / IEEE Computer Society Bioinformatics Conference. IEEE Computer Society Bioinformatics Conference., 2, pp. 124 - 131

GODKIN A; DAVENPORT M; THURSZ M; HILL A, 2003, '956 Molecular interactions of hepatitis B virus nucleocapsid and envelope peptides with HLA-DR1, -DR3, -DR7 and -DR13 glycoproteins', Hepatology, 38, pp. 618 - 618, http://dx.doi.org/10.1016/s0270-9139(03)80994-1

Back to profile page