By Professor Erik Meijering

Journal articles

Smal I; Grigoriev I; Akhmanova A; Niessen WJ; Meijering E, 2010, 'Microtubule dynamics analysis using kymographs and variable-rate particle filters', IEEE Transactions on Image Processing, 19, pp. 1861 - 1876, http://dx.doi.org/10.1109/TIP.2010.2045031

Meijering E, 2010, 'Neuron tracing in perspective', Cytometry Part A, 77, pp. 693 - 704, http://dx.doi.org/10.1002/cyto.a.20895

Stepanova T; Smal I; Van Haren J; Akinci U; Liu Z; Miedema M; Limpens R; Van Ham M; Van Der Reijden M; Poot R; Grosveld F; Mommaas M; Meijering E; Galjart N, 2010, 'History-dependent catastrophes regulate axonal microtubule behavior', Current Biology, 20, pp. 1023 - 1028, http://dx.doi.org/10.1016/j.cub.2010.04.024

Dzyubachyk O; Van Cappellen WA; Essers J; Niessen WJ; Meijering E, 2010, 'Advanced level-set-based cell tracking in time-lapse fluorescence microscopy', IEEE Transactions on Medical Imaging, 29, pp. 852 - 867, http://dx.doi.org/10.1109/TMI.2009.2038693

Smal I; Loog M; Niessen W; Meijering E, 2010, 'Quantitative comparison of spot detection methods in fluorescence microscopy', IEEE Transactions on Medical Imaging, 29, pp. 282 - 301, http://dx.doi.org/10.1109/TMI.2009.2025127

Dzyubachyk O; Van Cappellen WA; Essers J; Niessen WJ; Meijering E, 2010, 'Erratum: Advanced level-set-based cell tracking in time-lapse fluorescence microscopy (IEEE Transactions on Medical Imaging (2010) 29:3 (852-867))', IEEE Transactions on Medical Imaging, 29, pp. 1331, http://dx.doi.org/10.1109/TMI.2010.2049183

Aguilo MA; Aquino W; Brigham JC; Fatemi M, 2010, 'Correction to “An Inverse Problem Approach for Elasticity Imaging through Vibroacoustics” [Apr 10 1012-1021', IEEE Transactions on Medical Imaging, 29, pp. 1331 - 1331, http://dx.doi.org/10.1109/tmi.2010.2051071

De Weert TT; Cakir H; Rozie S; Cretier S; Meijering E; Dippel DWJ; Van Der Lugt A, 2009, 'Intracranial internal carotid artery calcifications: Association with vascular risk factors and ischemic cerebrovascular disease', American Journal of Neuroradiology, 30, pp. 177 - 184, http://dx.doi.org/10.3174/ajnr.A1301

Meijering E; Dzyubachyk O; Smal I; van Cappellen WA, 2009, 'Tracking in cell and developmental biology', Seminars in Cell and Developmental Biology, 20, pp. 894 - 902, http://dx.doi.org/10.1016/j.semcdb.2009.07.004

Smal I; Meijering E; Draegestein K; Galjart N; Grigoriev I; Akhmanova A; van Royen ME; Houtsmuller AB; Niessen W, 2008, 'Multiple object tracking in molecular bioimaging by Rao-Blackwellized marginal particle filtering', Medical Image Analysis, 12, pp. 764 - 777, http://dx.doi.org/10.1016/j.media.2008.03.004

Smal I; Draegestein K; Galjart N; Niessen W; Meijering E, 2008, 'Particle filtering for multiple object tracking in dynamic fluorescence microscopy images: Application to microtubule growth analysis', IEEE Transactions on Medical Imaging, 27, pp. 789 - 804, http://dx.doi.org/10.1109/TMI.2008.916964

Weert TT; Monyé C; Meijering E; Booij R; Niessen WJ; Dippel DWJ; Lugt A, 2008, 'Assessment of atherosclerotic carotid plaque volume with multidetector computed tomography angiography', International Journal of Cardiovascular Imaging, 24, pp. 751 - 759, http://dx.doi.org/10.1007/s10554-008-9309-1

van Velsen EFS; Niessen WJ; de Weert TT; de Monyé C; van der Lugt A; Meijering E; Stokking R, 2007, 'Evaluation of an improved technique for lumen path definition and lumen segmentation of atherosclerotic vessels in CT angiography', European Radiology, 17, pp. 1738 - 1745, http://dx.doi.org/10.1007/s00330-006-0469-x

De Weert TT; Ouhlous M; Meijering E; Zondervan PE; Hendriks JM; Van Sambeek MRHM; Dippel DWJ; Van Der Lugt A, 2006, 'In vivo characterization and quantification of atherosclerotic carotid plaque components with multidetector computed tomography and histopathological correlation', Arteriosclerosis, Thrombosis, and Vascular Biology, 26, pp. 2366 - 2372, http://dx.doi.org/10.1161/01.ATV.0000240518.90124.57

Gratama van Andel HAF; Meijering E; van der Lugt A; Vrooman HA; de Monyé C; Stokking R, 2006, 'Evaluation of an improved technique for automated center lumen line definition in cardiovascular image data', European Radiology, 16, pp. 391 - 398, http://dx.doi.org/10.1007/s00330-005-2854-2

Meijering E; Smal I; Danuser G, 2006, 'Tracking in molecular bioimaging', IEEE Signal Processing Magazine, 23, pp. 46 - 53, http://dx.doi.org/10.1109/MSP.2006.1628877

Murphy RF; Meijering E; Danuser G, 2005, 'Guest editorial', IEEE Transactions on Image Processing, 14, pp. 1233 - 1236, http://dx.doi.org/10.1109/TIP.2005.855701

Meijering E; Jacob M; Sarria JCF; Steiner P; Hirling H; Unser M, 2004, 'Design and Validation of a Tool for Neurite Tracing and Analysis in Fluorescence Microscopy Images', Cytometry Part A, 58, pp. 167 - 176, http://dx.doi.org/10.1002/cyto.a.20022

Meijering E; Unser M, 2003, 'A note on cubic convolution interpolation', IEEE Transactions on Image Processing, 12, pp. 477 - 479, http://dx.doi.org/10.1109/TIP.2003.811493

Meijering E, 2002, 'A chronology of interpolation: From ancient astronomy to modern signal and image processing', Proceedings of the IEEE, 90, pp. 319 - 342, http://dx.doi.org/10.1109/5.993400

Meijering E, 2002, 'A chronology of interpolation: From ancient astronomy to modern signal and image processing', Proceedings of the IEEE, 90, pp. 317 - 318, http://dx.doi.org/10.1109/JPROC.2002.993399

Meijering EHW; Niessen WJ; Viergever MA, 2001, 'Quantitative evaluation of convolution-based methods for medical image interpolation', Medical Image Analysis, 5, pp. 111 - 126, http://dx.doi.org/10.1016/S1361-8415(00)00040-2

Meijering EHW; Niessen WJ; Bakker J; Van der Molen AJ; De Kort GAP; Lo RTH; Mali WPTM; Viergever MA, 2001, 'Reduction of patient motion artifacts in digital subtraction angiography: Evaluation of a fast and fully automatic technique', Radiology, 219, pp. 288 - 293, http://dx.doi.org/10.1148/radiology.219.1.r01ap19288

Meijering EHW; Zuiderveld KJ; Viergever MA, 1999, 'Image reconstruction by convolution with symmetrical piecewise nth-order polynomial kernels', IEEE Transactions on Image Processing, 8, pp. 192 - 201, http://dx.doi.org/10.1109/83.743854

Meijering EHW; Zuiderveld KJ; Viergever MA, 1999, 'Image registration for digital subtraction angiography', International Journal of Computer Vision, 31, pp. 227 - 246, http://dx.doi.org/10.1023/a:1008074100927

Meijering EHW; Niessen WJ; Viergever MA, 1999, 'Retrospective motion correction in digital subtraction angiography: A review', IEEE Transactions on Medical Imaging, 18, pp. 2 - 21, http://dx.doi.org/10.1109/42.750248

Conference Papers

Khan TM; Iqbal S; Naqvi SS; Razzak I; Meijering E, 2024, 'LMBF-Net: A Lightweight Multipath Bidirectional Focal Attention Network For Multifeatures Segmentation', in 2024 IEEE International Conference on Image Processing (ICIP), IEEE, pp. 2807 - 2813, presented at 2024 IEEE International Conference on Image Processing (ICIP), 27 October 2024 - 30 October 2024, http://dx.doi.org/10.1109/icip51287.2024.10647542

Zhu Y; Tchetchenian A; Yin X; Liew A; Song Y; Meijering E, 2024, 'AC-UNet: Adaptive Connection UNet for White Matter Tract Segmentation Through Neural Architecture Search', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635404

Rahaman MM; Millar EKA; Meijering E, 2024, 'Histopathology Image Classification Using Supervised Contrastive Deep Learning', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635260

Hu Y; Meijering E; Song Y, 2024, 'Large-Kernel Attention Network with Distance Regression and Topological Self-correction for Airway Segmentation', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 115 - 126, http://dx.doi.org/10.1007/978-981-99-8388-9_10

Mondol RK; Millar EKA; Sowmya A; Meijering E, 2024, 'MM-Survnet: Deep Learning-Based Survival Risk Stratification in Breast Cancer Through Multimodal Data Fusion', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635810

Shanmugalingam K; Sowmya A; Moses D; Meijering E, 2024, 'Prostate Segmentation Using Multiparametric and Multiplanar Magnetic Resonance Images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 217 - 226, http://dx.doi.org/10.1007/978-3-031-45673-2_22

Sandarenu P; Chen J; Slapetova I; Browne L; Graham PH; Swarbrick A; Millar EKA; Song Y; Meijering E, 2024, 'Semi-Supervised Variational Autoencoder for Cell Feature Extraction In Multiplexed Immunofluorescence Images', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635107

Heng Z; Pagnucco M; Meijering E; Song Y, 2024, 'Vascular Topology Rectification Network for Automated Retinal Artery/Vein Segmentation', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635229

Khan TM; Arsalan M; Iqbal S; Razzak I; Meijering E, 2023, 'Feature Enhancer Segmentation Network (FES-Net)for Vessel Segmentation', in 2023 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2023, pp. 160 - 167, http://dx.doi.org/10.1109/DICTA60407.2023.00030

Brahmavar SB; Rajesh R; Dash T; Vig L; Verlekar TT; Hasan MM; Khan T; Meijering E; Srinivasan A, 2023, 'IKD+: Reliable Low Complexity Deep Models for Retinopathy Classification', in Proceedings - International Conference on Image Processing, ICIP, pp. 2400 - 2404, http://dx.doi.org/10.1109/ICIP49359.2023.10221899

Shanmugalingam K; Moses D; Sowmya A; Meijering E, 2023, 'Membranous Urethral Reconstruction and Segmentation in Multiplanar T2W MRI Images', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI53787.2023.10230618

Khan TM; Arsalan M; Robles-Kelly A; Meijering E, 2022, 'MKIS-Net: A Light-Weight Multi-Kernel Network for Medical Image Segmentation', in 2022 International Conference on Digital Image Computing: Techniques and Applications (DICTA), IEEE, pp. 1 - 8, presented at 2022 International Conference on Digital Image Computing: Techniques and Applications (DICTA), 30 November 2022 - 02 December 2022, http://dx.doi.org/10.1109/dicta56598.2022.10034573

Imani M; Dao TNQ; Meijering E; Duque G, 2022, 'DEVELOPMENT OF NOVEL FULLY AUTOMATIC SEGMENTATION AND QUANTIFICATION TECHNIQUE FOR ASSESSMENT OF MUSCULOSKELETAL ORGANS', in AGING CLINICAL AND EXPERIMENTAL RESEARCH, SPRINGER, pp. S220 - S220, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000853975600469&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1

Shanmugalingam K; Sowmya A; Moses D; Meijering E, 2022, 'Attention Guided Deep Supervision Model for Prostate Segmentation in Multisite Heterogeneous MRI Data', in Proceedings of Machine Learning Research, pp. 1085 - 1095

Fan L; Sowmya A; Meijering E; Song Y, 2022, 'Fast FF-to-FFPE Whole Slide Image Translation via Laplacian Pyramid and Contrastive Learning', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 409 - 419, http://dx.doi.org/10.1007/978-3-031-16434-7_40

Zhu J; Bolsterlee B; Chow BVY; Song Y; Meijering E, 2022, 'Hybrid Attentive Unet for Segmentation of Lower Leg Muscles and Bones From MRI Scans For Musculoskeletal Research', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI52829.2022.9761501

Rana P; Sowmya A; Meijering E; Song Y, 2022, 'Imbalanced Cell-Cycle Classification Using Wgan-Div and Mixup', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI52829.2022.9761488

Hu Y; Pan Y; Song Y; Meijering E; Cui Z; Zhao Y; Ding Z; Zhu M; Shen D, 2022, 'Parallel Sinogram and Image Framework With Co-Training Strategy for Metal Artifact Reduction in Tooth Ct Images', in Proceedings - International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI52829.2022.9761653

Rana P; Meijering E; Sowmya A; Song Y, 2021, 'Multi-label classification based on subcellular region-guided feature description for protein localisation', in Proceedings - International Symposium on Biomedical Imaging, pp. 1929 - 1933, http://dx.doi.org/10.1109/ISBI48211.2021.9434145

Fan L; Sowmya A; Meijering E; Song Y, 2021, 'Learning Visual Features by Colorization for Slide-Consistent Survival Prediction from Whole Slide Images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 592 - 601, http://dx.doi.org/10.1007/978-3-030-87237-3_57

Zhu Y; Meijering E, 2020, 'Neural Architecture Search for Microscopy Cell Segmentation', Lima, Peru, presented at Neural Architecture Search for Microscopy Cell Segmentation, Lima, Peru, 04 October 2020

Geurts SN; Oosterhof N; Kuil LE; Van Der Linde HC; Van Ham TJ; Meijering E, 2020, 'Automated Quantitative Analysis of Microglia in Bright-Field Images of Zebrafish', in Proceedings - International Symposium on Biomedical Imaging, pp. 522 - 525, http://dx.doi.org/10.1109/ISBI45749.2020.9098339

Smal I; Yao Y; Galjart N; Meijering E, 2019, 'Facilitating data association in particle tracking using autoencoding and score matching', in Proceedings - International Symposium on Biomedical Imaging, pp. 1523 - 1526, http://dx.doi.org/10.1109/ISBI.2019.8759418

Bergwerf H; Bechakra M; Smal I; Jongen JLM; Meijering E, 2019, 'Nerve fiber segmentation in bright-field microscopy images of skin biopsies using deep learning', in Proceedings - International Symposium on Biomedical Imaging, pp. 232 - 235, http://dx.doi.org/10.1109/ISBI.2019.8759504

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