By Professor Erik Meijering

Journal articles

Reuter M; Zelensky A; Smal I; Meijering E; van Cappellen WA; Martijn de Gruiter H; van Belle GJ; van Royen ME; Houtsmuller AB; Essers J; Kanaar R; Wyman C, 2015, 'Correction to: "BRCA2 diffuses as oligomeric clusters with RAD51 and changes mobility after DNA damage in live cells" [J. Cell Biol. Vol. 207 No. 5, December 8, 2014. Pages 599-613]', Journal of Cell Biology, 208, pp. 857 - 857, http://dx.doi.org/10.1083/jcb.20140501402182015c

Muñoz-Barrutia A; Kovačević J; Kozubek M; Meijering E; Parvin B, 2015, 'Quantitative bioimaging: Signal processing in light microscopy', IEEE Signal Processing Magazine, 32, pp. 18 - 19, http://dx.doi.org/10.1109/MSP.2014.2359691

Ortiz-De-Solórzano C; Muñoz-Barrutia A; Meijering E; Kozubek M, 2015, 'Toward a morphodynamic model of the cell: Signal processing for cell modeling', IEEE Signal Processing Magazine, 32, pp. 20 - 29, http://dx.doi.org/10.1109/MSP.2014.2358263

Ramnath NWM; Van De Luijtgaarden KM; Van Der Pluijm I; Van Nimwegen M; Van Heijningen PM; Swagemakers SMA; Van Thiel BS; Ridwan RY; Van Vliet N; Vermeij M; Hawinkels LJAC; De Munck A; Dzyubachyk O; Meijering E; Van Der Spek P; Rottier R; Yanagisawa H; Hendriks RW; Kanaar R; Rouwet EV; Kleinjan A; Essers J, 2014, 'Extracellular matrix defects in aneurysmal Fibulin-4 mice predispose to lung emphysema', Plos One, 9, http://dx.doi.org/10.1371/journal.pone.0106054

Dzyubachyk O; Khmelinskii A; Plenge E; Kok P; Snoeks TJA; Poot DHJ; Lowik CWGM; Botha CP; Niessen WJ; Van Der Weerd L; Meijering E; Lelieveldt BPF, 2014, 'Interactive local super-resolution reconstruction of whole-body MRI mouse data: A pilot study with applications to bone and kidney metastases', Plos One, 9, http://dx.doi.org/10.1371/journal.pone.0108730

Maška M; Ulman V; Svoboda D; Matula P; Matula P; Ederra C; Urbiola A; España T; Venkatesan S; Balak DMW; Karas P; Bolcková T; Štreitová M; Carthel C; Coraluppi S; Harder N; Rohr K; Magnusson KEG; Jaldén J; Blau HM; Dzyubachyk O; Křížek P; Hagen GM; Pastor-Escuredo D; Jimenez-Carretero D; Ledesma-Carbayo MJ; Muñoz-Barrutia A; Meijering E; Kozubek M; Ortiz-De-Solorzano C, 2014, 'A benchmark for comparison of cell tracking algorithms', Bioinformatics, 30, pp. 1609 - 1617, http://dx.doi.org/10.1093/bioinformatics/btu080

Chenouard N; Smal I; De Chaumont F; Maška M; Sbalzarini IF; Gong Y; Cardinale J; Carthel C; Coraluppi S; Winter M; Cohen AR; Godinez WJ; Rohr K; Kalaidzidis Y; Liang L; Duncan J; Shen H; Xu Y; Magnusson KEG; Jaldén J; Blau HM; Paul-Gilloteaux P; Roudot P; Kervrann C; Waharte F; Tinevez JY; Shorte SL; Willemse J; Celler K; Van Wezel GP; Dan HW; Tsai YS; De Solórzano CO; Olivo-Marin JC; Meijering E, 2014, 'Objective comparison of particle tracking methods', Nature Methods, 11, pp. 281 - 289, http://dx.doi.org/10.1038/nmeth.2808

Reuter M; Zelensky A; Smal I; Meijering E; van Cappellen WA; de Gruiter HM; van Belle GJ; van Royen ME; Houtsmuller AB; Essers J; Kanaar R; Wyman C, 2014, 'BRCA2 diffuses as oligomeric clusters with RAD51 and changes mobility after DNA damage in live cells', Journal of Cell Biology, 207, pp. 599 - 613, http://dx.doi.org/10.1083/jcb.201405014

Poole DS; Plenge E; Poot DHJ; Lakke EAJF; Niessen WJ; Meijering E; van der Weerd L, 2014, 'Three-dimensional inversion recovery manganese-enhanced MRI of mouse brain using super-resolution reconstruction to visualize nuclei involved in higher brain function', NMR in Biomedicine, 27, pp. 749 - 759, http://dx.doi.org/10.1002/nbm.3108

Plenge E; Poot DHJ; Niessen WJ; Meijering E, 2013, 'Super-resolution reconstruction using cross-scale self-similarity in multi-slice MRI', Lecture Notes in Computer Science Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics, 8151 LNCS, pp. 123 - 130, http://dx.doi.org/10.1007/978-3-642-40760-4_16

Mohan R; Katrukha EA; Doodhi H; Smal I; Meijering E; Kapitein LC; Steinmetz MO; Akhmanova A, 2013, 'End-binding proteins sensitize microtubules to the action of microtubule-targeting agents', Proceedings of the National Academy of Sciences of the United States of America, 110, pp. 8900 - 8905, http://dx.doi.org/10.1073/pnas.1300395110

Meijering E, 2012, 'Cell segmentation: 50 Years down the road [life Sciences]', IEEE Signal Processing Magazine, 29, pp. 140 - 145, http://dx.doi.org/10.1109/MSP.2012.2204190

Smal I; Carranza-Herrezuelo N; Klein S; Wielopolski P; Moelker A; Springeling T; Bernsen M; Niessen W; Meijering E, 2012, 'Reversible jump MCMC methods for fully automatic motion analysis in tagged MRI', Medical Image Analysis, 16, pp. 301 - 324, http://dx.doi.org/10.1016/j.media.2011.08.006

Plenge E; Poot DHJ; Bernsen M; Kotek G; Houston G; Wielopolski P; Van Der Weerd L; Niessen WJ; Meijering E, 2012, 'Super-resolution methods in MRI: Can they improve the trade-off between resolution, signal-to-noise ratio, and acquisition time?', Magnetic Resonance in Medicine, 68, pp. 1983 - 1993, http://dx.doi.org/10.1002/mrm.24187

Buey RM; Mohan R; Leslie K; Walzthoeni T; Missimer JH; Menzel A; Bjelić S; Bargsten K; Grigoriev I; Smal I; Meijering E; Aebersold R; Akhmanova A; Steinmetz MO, 2011, 'Insights into EB1 structure and the role of its c-terminal domain for discriminating microtubule tips from the lattice', Molecular Biology of the Cell, 22, pp. 2912 - 2923, http://dx.doi.org/10.1091/mbc.E11-01-0017

Grigoriev I; Yu KL; Martinez-Sanchez E; Serra-Marques A; Smal I; Meijering E; Demmers J; Peränen J; Pasterkamp RJ; Van Der Sluijs P; Hoogenraad CC; Akhmanova A, 2011, 'Rab6, Rab8, and MICAL3 cooperate in controlling docking and fusion of exocytotic carriers', Current Biology, 21, pp. 967 - 974, http://dx.doi.org/10.1016/j.cub.2011.04.030

Agarwal S; Van Cappellen WA; Guénolé A; Eppink B; Linsen SEV; Meijering E; Houtsmuller A; Kanaar R; Essers J, 2011, 'ATP-dependent and independent functions of Rad54 in genome maintenance', Journal of Cell Biology, 192, pp. 735 - 750, http://dx.doi.org/10.1083/jcb.201011025

Montenegro Gouveia S; Leslie K; Kapitein LC; Buey RM; Grigoriev I; Wagenbach M; Smal I; Meijering E; Hoogenraad CC; Wordeman L; Steinmetz MO; Akhmanova A, 2010, 'In vitro reconstitution of the functional interplay between MCAK and EB3 at microtubule plus ends', Current Biology, 20, pp. 1717 - 1722, http://dx.doi.org/10.1016/j.cub.2010.08.020

Dzyubachyk O; Essers J; van Cappellen WA; Baldeyron C; Inagaki A; Niessen WJ; Meijering E, 2010, 'Automated analysis of time-lapse fluorescence microscopy images: From live cell images to intracellular foci', Bioinformatics, 26, pp. 2424 - 2430, http://dx.doi.org/10.1093/bioinformatics/btq434

Smal I; Grigoriev I; Akhmanova A; Niessen WJ; Meijering E, 2010, 'Microtubule dynamics analysis using kymographs and variable-rate particle filters', IEEE Transactions on Image Processing, 19, pp. 1861 - 1876, http://dx.doi.org/10.1109/TIP.2010.2045031

Meijering E, 2010, 'Neuron tracing in perspective', Cytometry Part A, 77, pp. 693 - 704, http://dx.doi.org/10.1002/cyto.a.20895

Stepanova T; Smal I; Van Haren J; Akinci U; Liu Z; Miedema M; Limpens R; Van Ham M; Van Der Reijden M; Poot R; Grosveld F; Mommaas M; Meijering E; Galjart N, 2010, 'History-dependent catastrophes regulate axonal microtubule behavior', Current Biology, 20, pp. 1023 - 1028, http://dx.doi.org/10.1016/j.cub.2010.04.024

Dzyubachyk O; Van Cappellen WA; Essers J; Niessen WJ; Meijering E, 2010, 'Advanced level-set-based cell tracking in time-lapse fluorescence microscopy', IEEE Transactions on Medical Imaging, 29, pp. 852 - 867, http://dx.doi.org/10.1109/TMI.2009.2038693

Smal I; Loog M; Niessen W; Meijering E, 2010, 'Quantitative comparison of spot detection methods in fluorescence microscopy', IEEE Transactions on Medical Imaging, 29, pp. 282 - 301, http://dx.doi.org/10.1109/TMI.2009.2025127

Dzyubachyk O; Van Cappellen WA; Essers J; Niessen WJ; Meijering E, 2010, 'Erratum: Advanced level-set-based cell tracking in time-lapse fluorescence microscopy (IEEE Transactions on Medical Imaging (2010) 29:3 (852-867))', IEEE Transactions on Medical Imaging, 29, pp. 1331, http://dx.doi.org/10.1109/TMI.2010.2049183

Aguilo MA; Aquino W; Brigham JC; Fatemi M, 2010, 'Correction to “An Inverse Problem Approach for Elasticity Imaging through Vibroacoustics” [Apr 10 1012-1021', IEEE Transactions on Medical Imaging, 29, pp. 1331 - 1331, http://dx.doi.org/10.1109/tmi.2010.2051071

De Weert TT; Cakir H; Rozie S; Cretier S; Meijering E; Dippel DWJ; Van Der Lugt A, 2009, 'Intracranial internal carotid artery calcifications: Association with vascular risk factors and ischemic cerebrovascular disease', American Journal of Neuroradiology, 30, pp. 177 - 184, http://dx.doi.org/10.3174/ajnr.A1301

Meijering E; Dzyubachyk O; Smal I; van Cappellen WA, 2009, 'Tracking in cell and developmental biology', Seminars in Cell and Developmental Biology, 20, pp. 894 - 902, http://dx.doi.org/10.1016/j.semcdb.2009.07.004

Smal I; Meijering E; Draegestein K; Galjart N; Grigoriev I; Akhmanova A; van Royen ME; Houtsmuller AB; Niessen W, 2008, 'Multiple object tracking in molecular bioimaging by Rao-Blackwellized marginal particle filtering', Medical Image Analysis, 12, pp. 764 - 777, http://dx.doi.org/10.1016/j.media.2008.03.004

Smal I; Draegestein K; Galjart N; Niessen W; Meijering E, 2008, 'Particle filtering for multiple object tracking in dynamic fluorescence microscopy images: Application to microtubule growth analysis', IEEE Transactions on Medical Imaging, 27, pp. 789 - 804, http://dx.doi.org/10.1109/TMI.2008.916964

Weert TT; Monyé C; Meijering E; Booij R; Niessen WJ; Dippel DWJ; Lugt A, 2008, 'Assessment of atherosclerotic carotid plaque volume with multidetector computed tomography angiography', International Journal of Cardiovascular Imaging, 24, pp. 751 - 759, http://dx.doi.org/10.1007/s10554-008-9309-1

van Velsen EFS; Niessen WJ; de Weert TT; de Monyé C; van der Lugt A; Meijering E; Stokking R, 2007, 'Evaluation of an improved technique for lumen path definition and lumen segmentation of atherosclerotic vessels in CT angiography', European Radiology, 17, pp. 1738 - 1745, http://dx.doi.org/10.1007/s00330-006-0469-x

De Weert TT; Ouhlous M; Meijering E; Zondervan PE; Hendriks JM; Van Sambeek MRHM; Dippel DWJ; Van Der Lugt A, 2006, 'In vivo characterization and quantification of atherosclerotic carotid plaque components with multidetector computed tomography and histopathological correlation', Arteriosclerosis Thrombosis and Vascular Biology, 26, pp. 2366 - 2372, http://dx.doi.org/10.1161/01.ATV.0000240518.90124.57

Gratama van Andel HAF; Meijering E; van der Lugt A; Vrooman HA; de Monyé C; Stokking R, 2006, 'Evaluation of an improved technique for automated center lumen line definition in cardiovascular image data', European Radiology, 16, pp. 391 - 398, http://dx.doi.org/10.1007/s00330-005-2854-2

Meijering E; Smal I; Danuser G, 2006, 'Tracking in molecular bioimaging', IEEE Signal Processing Magazine, 23, pp. 46 - 53, http://dx.doi.org/10.1109/MSP.2006.1628877

Murphy RF; Meijering E; Danuser G, 2005, 'Guest editorial', IEEE Transactions on Image Processing, 14, pp. 1233 - 1236, http://dx.doi.org/10.1109/TIP.2005.855701

Meijering E; Jacob M; Sarria JCF; Steiner P; Hirling H; Unser M, 2004, 'Design and Validation of a Tool for Neurite Tracing and Analysis in Fluorescence Microscopy Images', Cytometry Part A, 58, pp. 167 - 176, http://dx.doi.org/10.1002/cyto.a.20022

Meijering E; Unser M, 2003, 'A note on cubic convolution interpolation', IEEE Transactions on Image Processing, 12, pp. 477 - 479, http://dx.doi.org/10.1109/TIP.2003.811493

Meijering E, 2002, 'A chronology of interpolation: From ancient astronomy to modern signal and image processing', Proceedings of the IEEE, 90, pp. 319 - 342, http://dx.doi.org/10.1109/5.993400

Meijering E, 2002, 'A chronology of interpolation: From ancient astronomy to modern signal and image processing', Proceedings of the IEEE, 90, pp. 317 - 318, http://dx.doi.org/10.1109/JPROC.2002.993399

Meijering EHW; Niessen WJ; Viergever MA, 2001, 'Quantitative evaluation of convolution-based methods for medical image interpolation', Medical Image Analysis, 5, pp. 111 - 126, http://dx.doi.org/10.1016/S1361-8415(00)00040-2

Meijering EHW; Niessen WJ; Bakker J; Van der Molen AJ; De Kort GAP; Lo RTH; Mali WPTM; Viergever MA, 2001, 'Reduction of patient motion artifacts in digital subtraction angiography: Evaluation of a fast and fully automatic technique', Radiology, 219, pp. 288 - 293, http://dx.doi.org/10.1148/radiology.219.1.r01ap19288

Meijering EHW; Zuiderveld KJ; Viergever MA, 1999, 'Image reconstruction by convolution with symmetrical piecewise nth-order polynomial kernels', IEEE Transactions on Image Processing, 8, pp. 192 - 201, http://dx.doi.org/10.1109/83.743854

Meijering EHW; Zuiderveld KJ; Viergever MA, 1999, 'Image registration for digital subtraction angiography', International Journal of Computer Vision, 31, pp. 227 - 246, http://dx.doi.org/10.1023/a:1008074100927

Meijering EHW; Niessen WJ; Viergever MA, 1999, 'Retrospective motion correction in digital subtraction angiography: A review', IEEE Transactions on Medical Imaging, 18, pp. 2 - 21, http://dx.doi.org/10.1109/42.750248

Conference Papers

Gala D; Keniya J; Marisetty HV; Gupta M; Verlekar TT; Meijering E; Srinivasan A, 2025, 'Accelerating Medical Image Analysis on Edge Devices: A Study with MobileOne Architecture', in IEEE International Conference on Pervasive Computing and Communications Workshops Percom Workshops, pp. 158 - 163, http://dx.doi.org/10.1109/PerComWorkshops65533.2025.00058

Luo Y; Meijering E; Song Y, 2025, 'Enhancing Change Detection in Remote Sensing: Integrating Synthetic Data with Semi-Supervised Learning', in ICASSP IEEE International Conference on Acoustics Speech and Signal Processing Proceedings, http://dx.doi.org/10.1109/ICASSP49660.2025.10889224

Zhu Y; Tchetchenian A; Yin X; Liew A; Song Y; Meijering E, 2024, 'AC-UNet: Adaptive Connection UNet for White Matter Tract Segmentation Through Neural Architecture Search', in Proceedings International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635404

Kappan MM; Sandoval EB; Meijering E; Cruz F, 2024, 'Attention-Enhanced Lightweight Hourglass Network for Human Pose Estimation', in Australasian Conference on Robotics and Automation Acra

Rahaman MM; Millar EKA; Meijering E, 2024, 'Histopathology Image Classification Using Supervised Contrastive Deep Learning', in Proceedings International Symposium on Biomedical Imaging, http://dx.doi.org/10.1109/ISBI56570.2024.10635260

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