By Professor Shinichi Nakagawa

Journal articles

Usui T; Noble DWA; O'Dea RE; Fangmeier ML; Lagisz M; Hesselson D; Nakagawa S; O'Dea R, 2018, 'The French press: A repeatable and high-throughput approach to exercising zebrafish (Danio rerio)', PeerJ, 2018, pp. e4292, http://dx.doi.org/10.7717/peerj.4292

Nakagawa S; de Villemereuil P, 2018, 'A simple and general method for simultaneously accounting for phylogenetic and species sampling uncertainty via Rubin’s rules in comparative analysis', , http://dx.doi.org/10.7287/peerj.preprints.1216v2

Sánchez-Tójar A; Nakagawa S; Sánchez-Fortún M; Martin D; Ramani S; Girndt A; Bókony V; Kempenaers B; Liker A; Westneat D; Burke T; Schroeder J, 2018, 'Meta-analysis challenges a textbook example of status signalling: evidence for publication bias', , http://dx.doi.org/10.1101/283150

Hui SP; Sheng DZ; Sugimoto K; Gonzalez-Rajal A; Nakagawa S; Hesselson D; Kikuchi K, 2017, 'Zebrafish Regulatory T Cells Mediate Organ-Specific Regenerative Programs', Developmental Cell, 43, pp. 659 - 672.e5, http://dx.doi.org/10.1016/j.devcel.2017.11.010

Nakagawa S; Kar F; O'Dea RE; Pick JL; Lagisz M; O'Dea R, 2017, 'Divide and conquer? Size adjustment with allometry and intermediate outcomes', BMC Biology, 15, pp. 107, http://dx.doi.org/10.1186/s12915-017-0448-5

Garratt M; Nakagawa S; Simons MJP, 2017, 'Life-span Extension with Reduced Somatotrophic Signaling: Moderation of Aging Effect by Signal Type, Sex, and Experimental Cohort', Journals of Gerontology - Series A Biological Sciences and Medical Sciences, 72, pp. 1620 - 1626, http://dx.doi.org/10.1093/gerona/glx010

Stoffel MA; Nakagawa S; Schielzeth H, 2017, 'rptR: repeatability estimation and variance decomposition by generalized linear mixed-effects models', Methods in Ecology and Evolution, 8, pp. 1639 - 1644, http://dx.doi.org/10.1111/2041-210X.12797

Holtmann B; Santos ESA; Lara CE; Nakagawa S, 2017, 'Personality-matching habitat choice, rather than behavioural plasticity, is a likely driver of a phenotype‒environment covariance', Proceedings of the Royal Society B: Biological Sciences, 284, http://dx.doi.org/10.1098/rspb.2017.0943

Muniz DG; Santos ESA; Guimarães PR; Nakagawa S; Machado G, 2017, 'A multinomial network method for the analysis of mate choice and assortative mating in spatially structured populations', Methods in Ecology and Evolution, 8, pp. 1321 - 1331, http://dx.doi.org/10.1111/2041-210X.12798

Miyahara M; Lagisz M; Nakagawa S; Henderson SE, 2017, 'A narrative meta-review of a series of systematic and meta-analytic reviews on the intervention outcome for children with developmental co-ordination disorder', Child: Care, Health and Development, 43, pp. 733 - 742, http://dx.doi.org/10.1111/cch.12437

Lamb SD; Taylor HR; Holtmann B; Santos ESA; Tamayo JH; Johnson SL; Nakagawa S; Lara CE, 2017, 'Coprophagy in Dunnocks (Prunella modularis): A Frequent Behavior in Females, Infrequent in Males, and Very Unusual in Nestlings', Wilson Journal of Ornithology, 129, pp. 615 - 620, http://dx.doi.org/10.1676/16-059.1

Nakagawa S; Johnson PCD; Schielzeth H, 2017, 'The coefficient of determination R² and intra-class correlation coefficient from generalized linear mixed-effects models revisited and expanded', Journal of the Royal Society Interface, 14, http://dx.doi.org/10.1098/rsif.2017.0213

Miyahara M; Hillier SL; Pridham L; Nakagawa S, 2017, 'Task-oriented interventions for children with developmental co-ordination disorder', Cochrane Database of Systematic Reviews, 2017, http://dx.doi.org/10.1002/14651858.CD010914.pub2

Griesser M; Drobniak SM; Nakagawa S; Botero CA, 2017, 'Family living sets the stage for cooperative breeding and ecological resilience in birds', PLoS Biology, 15, pp. e2000483, http://dx.doi.org/10.1371/journal.pbio.2000483

Cornwell W; Nakagawa S, 2017, 'Phylogenetic comparative methods', Current Biology, 27, pp. R333 - R336, http://dx.doi.org/10.1016/j.cub.2017.03.049

Hsu YH; Simons MJP; Schroeder J; Girndt A; Winney IS; Burke T; Nakagawa S, 2017, 'Age-dependent trajectories differ between within-pair and extra-pair paternity success', Journal of Evolutionary Biology, 30, pp. 951 - 959, http://dx.doi.org/10.1111/jeb.13058

Gessner C; Nakagawa S; Zavodna M; Gemmell NJ, 2017, 'Sexual selection for genetic compatibility: The role of the major histocompatibility complex on cryptic female choice in Chinook salmon (Oncorhynchus tshawytscha)', Heredity, 118, pp. 442 - 452, http://dx.doi.org/10.1038/hdy.2016.116

Vincze E; Seress G; Lagisz M; Nakagawa S; Dingemanse NJ; Sprau P, 2017, 'Does Urbanization Affect Predation of Bird Nests? A Meta-Analysis', Frontiers in Ecology and Evolution, 5, http://dx.doi.org/10.3389/fevo.2017.00029

Parker TH; Nakagawa S, 2017, 'Practical models for publishing replications in behavioral ecology: A comment on Ihle et al.', Behavioral Ecology, 28, pp. 355 - 357, http://dx.doi.org/10.1093/beheco/arw191

Nakagawa S; Noble DWA; Senior AM; Lagisz M, 2017, 'Meta-evaluation of meta-analysis: Ten appraisal questions for biologists', BMC Biology, 15, pp. 18, http://dx.doi.org/10.1186/s12915-017-0357-7

Senior AM; Nakagawa S; Raubenheimer D; Simpson SJ; Noble DWA, 2017, 'Dietary restriction increases variability in longevity', Biology Letters, 13, http://dx.doi.org/10.1098/rsbl.2017.0057

Holtmann B; Lagisz M; Nakagawa S, 2017, 'Metabolic rates, and not hormone levels, are a likely mediator of between-individual differences in behaviour: a meta-analysis', Functional Ecology, 31, pp. 685 - 696, http://dx.doi.org/10.1111/1365-2435.12779

Sánchez-Tójar A; Winney I; Girndt A; Simons MJP; Nakagawa S; Burke T; Schroeder J, 2017, 'Winter territory prospecting is associated with life-history stage but not activity in a passerine', Journal of Avian Biology, 48, pp. 407 - 416, http://dx.doi.org/10.1111/jav.01055

Booksmythe I; Mautz B; Davis J; Nakagawa S; Jennions MD, 2017, 'Facultative adjustment of the offspring sex ratio and male attractiveness: a systematic review and meta-analysis', Biological Reviews, 92, pp. 108 - 134, http://dx.doi.org/10.1111/brv.12220

Allegue H; Araya-Ajoy YG; Dingemanse NJ; Dochtermann NA; Garamszegi LZ; Nakagawa S; Réale D; Schielzeth H; Westneat DF, 2017, 'Statistical Quantification of Individual Differences (SQuID): an educational and statistical tool for understanding multilevel phenotypic data in linear mixed models', Methods in Ecology and Evolution, 8, pp. 257 - 267, http://dx.doi.org/10.1111/2041-210X.12659

Foo YZ; Nakagawa S; Rhodes G; Simmons LW, 2017, 'The effects of sex hormones on immune function: a meta-analysis', Biological Reviews, 92, pp. 551 - 571, http://dx.doi.org/10.1111/brv.12243

Delhey K; Szecsenyi B; Nakagawa S; Peters A, 2017, 'Conspicuous plumage colours are highly variable', Proceedings of the Royal Society B: Biological Sciences, 284, http://dx.doi.org/10.1098/rspb.2016.2593

Andrew SC; Awasthy M; Griffith AD; Nakagawa S; Griffith SC, 2017, 'Clinal variation in avian body size is better explained by summer maximum temperatures during development than by cold winter temperatures', Auk, 135, pp. 206 - 217, http://dx.doi.org/10.1642/AUK-17-129.1

Noble DWA; Lagisz M; O’dea RE; Nakagawa S, 2017, 'Nonindependence and sensitivity analyses in ecological and evolutionary meta-analyses', Molecular Ecology, 26, pp. 2410 - 2425, http://dx.doi.org/10.1111/mec.14031

Santos E; Nakagawa S, 2017, 'Facultative adjustment of paternal care in the face of female infidelity in dunnocks', , http://dx.doi.org/10.1101/158816

de Villemereuil P; Morrissey M; Nakagawa S; Schielzeth H, 2017, 'Fixed effect variance and the estimation of the heritability: Issues and solutions', , http://dx.doi.org/10.1101/159210

Mcgeoch M; Latombe G; Andrew N; Nakagawa S; Nipperess D; Roige M; Marzinelli E; Campbell A; Vergés A; Thomas T; Steinberg P; Selwood K; Hui C, 2017, 'The application of zeta diversity as a continuous measure of compositional change in ecology', , http://dx.doi.org/10.1101/216580

Quesnel-Vallieres M; Dargaei Z; Irimia M; Gonatopoulos-Pournatzis T; Ip JY; Wu M; Sterne-Weiler T; Nakagawa S; Woodin MA; Blencowe BJ; Cordes SP, 2016, 'Misregulation of an Activity-Dependent Splicing Network as a Common Mechanism Underlying Autism Spectrum Disorders', MOLECULAR CELL, 64, pp. 1023 - 1034, http://dx.doi.org/10.1016/j.molcel.2016.11.033

Parker TH; Forstmeier W; Koricheva J; Fidler F; Hadfield JD; Chee YE; Kelly CD; Gurevitch J; Nakagawa S, 2016, 'Fraud Not a Primary Cause of Irreproducible Results: A Reply to Clark et al.', Trends in Ecology and Evolution, 31, pp. 900, http://dx.doi.org/10.1016/j.tree.2016.09.004

Senior AM; Grueber CE; Kamiya T; Lagisz M; O'Dwyer K; Santos ESA; Nakagawa S, 2016, 'Heterogeneity in ecological and evolutionary meta-analyses: Its magnitude and implications', Ecology, 97, pp. 3293 - 3299, http://dx.doi.org/10.1002/ecy.1591

Parker TH; Main E; Nakagawa S; Gurevitch J; Jarrad F; Burgman M, 2016, 'Promoting transparency in conservation science', Conservation Biology, 30, pp. 1149 - 1150, http://dx.doi.org/10.1111/cobi.12760

Nakagawa S; Pick JL, 2016, 'House sparrows', Current Biology, 26, pp. R1171 - R1173, http://dx.doi.org/10.1016/j.cub.2016.07.047

Besson AA; Lagisz M; Senior AM; Hector KL; Nakagawa S, 2016, 'Effect of maternal diet on offspring coping styles in rodents: a systematic review and meta-analysis', Biological Reviews, 91, pp. 1065 - 1080, http://dx.doi.org/10.1111/brv.12210

de Villemereuil P; Schielzeth H; Nakagawa S; Morrissey M, 2016, 'General methods for evolutionary quantitative genetic inference from generalized mixed models', Genetics, 204, pp. 1281 - 1294, http://dx.doi.org/10.1534/genetics.115.186536

Moatt JP; Nakagawa S; Lagisz M; Walling CA, 2016, 'The effect of dietary restriction on reproduction: a meta-analytic perspective', BMC Evolutionary Biology, 16, pp. 1 - 9, http://dx.doi.org/10.1186/s12862-016-0768-z

Moatt JP; Nakagawa S; Lagisz M; Walling CA, 2016, 'The effect of dietary restriction on reproduction: a meta-analytic perspective', BMC evolutionary biology, 16, pp. 199

Senior AM; Lim JN; Adolfsson S; Lamatsch DK; Nakagawa S, 2016, 'Condition and reproductive investment in the western mosquitofish (Gambusia affinis): little evidence for condition-dependent sex-biased investment', Biological Journal of the Linnean Society, 119, pp. 430 - 435, http://dx.doi.org/10.1111/bij.12813

Parker TH; Nakagawa S; Gurevitch J, 2016, 'Promoting transparency in evolutionary biology, ecology, and ornithology', Auk, 133, pp. 779 - 782, http://dx.doi.org/10.1642/AUK-16-122.1

Nakagawa S; Lagisz M, 2016, 'Visualizing unbiased and biased unweighted meta-analyses', Journal of Evolutionary Biology, 29, pp. 1914 - 1916, http://dx.doi.org/10.1111/jeb.12945

Chatterjee A; Lagisz M; Rodger EJ; Zhen L; Stockwell PA; Duncan EJ; Horsfield JA; Jeyakani J; Mathavan S; Ozaki Y; Nakagawa S, 2016, 'Sex differences in DNA methylation and expression in zebrafish brain: a test of an extended ‘male sex drive’ hypothesis', Gene, 590, pp. 307 - 316, http://dx.doi.org/10.1016/j.gene.2016.05.042

West JA; Mito M; Kurosaka S; Takumi T; Tanegashima C; Chujo T; Yanaka K; Kingston RE; Hirose T; Bond C; Fox A; Nakagawa S, 2016, 'Structural, super-resolution microscopy analysis of paraspeckle nuclear body organization.', J Cell Biol, 214, pp. 817 - 830, http://dx.doi.org/10.1083/jcb.201601071

Parker TH; Forstmeier W; Koricheva J; Fidler F; Hadfield JD; Chee YE; Kelly CD; Gurevitch J; Nakagawa S, 2016, 'Transparency in Ecology and Evolution: Real Problems, Real Solutions', Trends in Ecology and Evolution, 31, pp. 711 - 719, http://dx.doi.org/10.1016/j.tree.2016.07.002

Garratt M; Nakagawa S; Simons MJP, 2016, 'Comparative idiosyncrasies in life extension by reduced mTOR signalling and its distinctiveness from dietary restriction', Aging Cell, 15, pp. 737 - 743, http://dx.doi.org/10.1111/acel.12489

Schroeder J; Hsu YH; Winney I; Simons M; Nakagawa S; Burke T, 2016, 'Predictably philandering females prompt poor paternal provisioning', American Naturalist, 188, pp. 219 - 230, http://dx.doi.org/10.1086/687243

Parker TH; Nakagawa S; Gurevitch J, 2016, 'Promoting transparency in evolutionary biology and ecology', Ecology letters, 19, pp. 726 - 728, http://dx.doi.org/10.1111/ele.12610

Back to profile page