Select Publications
Conference Papers
2018, 'Memory and Time Efficient 3D Neuron Morphology Tracing in Large-scale Images', in Murshed M; Paul M; Asikuzzaman M; Pickering M; Natu A; RoblesKelly A; You S; Zheng L; Rahman A (eds.), 2018 INTERNATIONAL CONFERENCE ON DIGITAL IMAGE COMPUTING: TECHNIQUES AND APPLICATIONS (DICTA), IEEE, AUSTRALIA, Canberra, pp. 39 - 46, presented at International Conference on Digital Image Computing - Techniques and Applications (DICTA), AUSTRALIA, Canberra, 10 December 2018 - 13 December 2018, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000461416000007&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2018, 'Densely connected large kernel convolutional network for semantic membrane segmentation in microscopy images', in Proceedings - International Conference on Image Processing, ICIP, pp. 2461 - 2465, http://dx.doi.org/10.1109/ICIP.2018.8451775
,2018, 'Whole Slide Image Classification via Iterative Patch Labelling', in Proceedings - International Conference on Image Processing, ICIP, pp. 1408 - 1412, http://dx.doi.org/10.1109/ICIP.2018.8451551
,2018, 'Feature learning with component selective encoding for histopathology image classification', in Proceedings - International Symposium on Biomedical Imaging, pp. 257 - 260, http://dx.doi.org/10.1109/ISBI.2018.8363568
,2018, 'Nuclei instance segmentation with dual contour-enhanced adversarial network', in Proceedings - International Symposium on Biomedical Imaging, pp. 409 - 412, http://dx.doi.org/10.1109/ISBI.2018.8363604
,2018, '3D Large Kernel Anisotropic Network for Brain Tumor Segmentation', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 444 - 454, http://dx.doi.org/10.1007/978-3-030-04239-4_40
,2018, 'Automated Analysis of Chest Radiographs for Cystic Fibrosis Scoring', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 227 - 236, http://dx.doi.org/10.1007/978-3-030-00563-4_22
,2018, 'Multiscale network followed network model for retinal vessel segmentation', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 119 - 126, http://dx.doi.org/10.1007/978-3-030-00934-2_14
,2018, 'Panoptic segmentation with an end-to-end cell R-CNN for pathology image analysis', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 237 - 244, http://dx.doi.org/10.1007/978-3-030-00934-2_27
,2017, 'Locally-Transferred Fisher Vectors for Texture Classification', in Proceedings of the IEEE International Conference on Computer Vision, pp. 4922 - 4930, http://dx.doi.org/10.1109/ICCV.2017.526
,2017, 'Automatic 3D Single Neuron Reconstruction with Exhaustive Tracing', in Proceedings - 2017 IEEE International Conference on Computer Vision Workshops, ICCVW 2017, pp. 126 - 133, http://dx.doi.org/10.1109/ICCVW.2017.23
,2017, 'Adapting fisher vectors for histopathology image classification', in Proceedings - International Symposium on Biomedical Imaging, pp. 600 - 603, http://dx.doi.org/10.1109/ISBI.2017.7950592
,2017, 'Automated connectivity-based groupwise cortical atlas generation: Application to data of neurosurgical patients with brain tumors for cortical parcellation prediction', in Proceedings - International Symposium on Biomedical Imaging, pp. 774 - 777, http://dx.doi.org/10.1109/ISBI.2017.7950633
,2017, 'Automated multi-stage segmentation of white blood cells via optimizing color processing', in Proceedings - International Symposium on Biomedical Imaging, pp. 565 - 568, http://dx.doi.org/10.1109/ISBI.2017.7950584
,2017, 'Comparison between two white matter segmentation strategies: An investigation into white matter segmentation consistency', in Proceedings - International Symposium on Biomedical Imaging, pp. 796 - 799, http://dx.doi.org/10.1109/ISBI.2017.7950638
,2017, 'Supervised intra-embedding of fisher vectors for histopathology image classification', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 99 - 106, http://dx.doi.org/10.1007/978-3-319-66179-7_12
,2017, 'Supra-threshold fiber cluster statistics for data-driven whole brain tractography analysis', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 556 - 565, http://dx.doi.org/10.1007/978-3-319-66182-7_64
,2017, 'Triple-crossing 2.5D convolutional neural network for detecting neuronal arbours in 3D microscopic images', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 185 - 193, http://dx.doi.org/10.1007/978-3-319-67389-9_22
,2016, 'Large-Scale Analysis of Viewing Behavior', in Proceedings of the 25th ACM International on Conference on Information and Knowledge Management, ACM, presented at CIKM'16: ACM Conference on Information and Knowledge Management, http://dx.doi.org/10.1145/2983323.2983846
,2016, 'Automatic nuclei and cytoplasm segmentation of leukocytes with color and texture-based image enhancement', in Proceedings - International Symposium on Biomedical Imaging, pp. 935 - 938, http://dx.doi.org/10.1109/ISBI.2016.7493418
,2016, 'Fiber clustering based white matter connectivity analysis for prediction of Autism Spectrum Disorder using diffusion tensor imaging', in Proceedings - International Symposium on Biomedical Imaging, pp. 564 - 567, http://dx.doi.org/10.1109/ISBI.2016.7493331
,2016, 'Texture analysis of tissue aging using global and cluster constrained local coding', in Proceedings - International Symposium on Biomedical Imaging, pp. 1229 - 1232, http://dx.doi.org/10.1109/ISBI.2016.7493488
,2016, 'Clique identification and propagation for multimodal brain Tumor image segmentation', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 285 - 294, http://dx.doi.org/10.1007/978-3-319-47103-7_28
,2016, 'Histopathology image categorization with discriminative dimension reduction of fisher vectors', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 306 - 317, http://dx.doi.org/10.1007/978-3-319-46604-0_22
,2015, 'Beating cilia identification in fluorescence microscope images for accurate CBF measurement', in Proceedings - International Conference on Image Processing, ICIP, pp. 4496 - 4500, http://dx.doi.org/10.1109/ICIP.2015.7351657
,2015, 'Morphological Filtering and Hierarchical Deformation for Partially Overlapping Cell Segmentation', in 2015 INTERNATIONAL CONFERENCE ON DIGITAL IMAGE COMPUTING: TECHNIQUES AND APPLICATIONS (DICTA), IEEE, AUSTRALIA, Adelaide, pp. 527 - 533, presented at International Conference on Digital Image Computing: Techniques and Applications, AUSTRALIA, Adelaide, 23 November 2015 - 25 November 2015, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000380485600074&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2015, 'Fusing subcategory probabilities for texture classification', in Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition, pp. 4409 - 4417, http://dx.doi.org/10.1109/CVPR.2015.7299070
,2015, 'Bone texture characterization with fisher encoding of local descriptors', in Proceedings - International Symposium on Biomedical Imaging, pp. 5 - 8, http://dx.doi.org/10.1109/ISBI.2015.7163803
,2015, 'Latent semantic association for medical image retrieval', in 2014 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2014, http://dx.doi.org/10.1109/DICTA.2014.7008114
,2015, 'Learning shape-driven segmentation based on neural network and sparse reconstruction toward automated cell analysis of cervical smears', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 390 - 400, http://dx.doi.org/10.1007/978-3-319-26532-2_43
,2015, 'Morphological Filtering and Hierarchical Deformation for Partially Overlapping Cell Segmentation', in 2015 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2015, http://dx.doi.org/10.1109/DICTA.2015.7371285
,2015, 'Motion representation of ciliated cell images with contour-alignment for automated CBF estimation', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 300 - 307, http://dx.doi.org/10.1007/978-3-319-24574-4_36
,2015, 'Ranking-based vocabulary pruning in bag-of-features for image retrieval', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 436 - 445, http://dx.doi.org/10.1007/978-3-319-14803-8_34
,2015, 'USYD/HES-SO in the VISCERAL retrieval benchmark', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 139 - 143, http://dx.doi.org/10.1007/978-3-319-24471-6_13
,2014, 'Hierarchical and binary spatial descriptors for lung nodule image retrieval', in 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014, pp. 6463 - 6466, http://dx.doi.org/10.1109/EMBC.2014.6945108
,2014, 'A ranking-based lung nodule image classification method using unlabeled image knowledge', in 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014, pp. 1356 - 1359, http://dx.doi.org/10.1109/isbi.2014.6868129
,2014, 'Automated feedback extraction for medical imaging retrieval', in 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014, pp. 907 - 910, http://dx.doi.org/10.1109/isbi.2014.6868018
,2014, 'Image-based ciliary beating frequency estimation for therapeutic assessment on defective mucociliary clearance diseases', in 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014, pp. 193 - 196, http://dx.doi.org/10.1109/isbi.2014.6867842
,2014, 'Volume-of-interest retrieval for PET-CT images with a conditional random field alignment', in JOURNAL OF NUCLEAR MEDICINE, SOC NUCLEAR MEDICINE INC, MO, St Louis, presented at Annual Meeting of the Society-of-Nuclear-Medicine-and-Molecular-Imaging (SNMMI), MO, St Louis, 07 June 2014 - 11 June 2014, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000361438104226&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2014, 'Volume-of-interest retrieval for PET-CT images with a conditional random field alignment', in JOURNAL OF NUCLEAR MEDICINE, SOC NUCLEAR MEDICINE INC, MO, St Louis, presented at Annual Meeting of the Society-of-Nuclear-Medicine-and-Molecular-Imaging (SNMMI), MO, St Louis, 07 June 2014 - 11 June 2014, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000361438103236&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2014, 'A 3D difference-of-Gaussian-based lesion detector for brain PET', in 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), IEEE, presented at 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI 2014), 29 April 2014 - 02 May 2014, http://dx.doi.org/10.1109/isbi.2014.6867961
,2014, 'BOOSTED MULTIFOLD SPARSE REPRESENTATION WITH APPLICATION TO ILD CLASSIFICATION', in 2014 IEEE 11th International Symposium on Biomedical Imaging (ISBI), IEEE, PEOPLES R CHINA, Beijing, pp. 1023 - 1026, presented at 11th IEEE International Symposium on Biomedical Imaging (ISBI), PEOPLES R CHINA, Beijing, 29 April 2014 - 02 May 2014, https://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000392750900254&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=891bb5ab6ba270e68a29b250adbe88d1
,2014, 'Automated three-stage nucleus and cytoplasm segmentation of overlapping cells', in 2014 13th International Conference on Control Automation Robotics and Vision, ICARCV 2014, pp. 865 - 870, http://dx.doi.org/10.1109/ICARCV.2014.7064418
,2014, 'Large margin aggregation of local estimates for medical image classification', in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), pp. 196 - 203, http://dx.doi.org/10.1007/978-3-319-10470-6_25
,2013, 'Context curves for classification of lung nodule images', in 2013 International Conference on Digital Image Computing: Techniques and Applications, DICTA 2013, http://dx.doi.org/10.1109/DICTA.2013.6691494
,2013, 'A bag-of-importance model for video summarization', in Electronic Proceedings of the 2013 IEEE International Conference on Multimedia and Expo Workshops, ICMEW 2013, http://dx.doi.org/10.1109/ICMEW.2013.6618454
,2013, 'Cell nuclei segmentation in fluorescence microscopy images using inter- and intra-region discriminative information', in Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS, pp. 6087 - 6090, http://dx.doi.org/10.1109/EMBC.2013.6610941
,2013, 'Fully automated scoring of chest radiographs in cystic fibrosis', in Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS, pp. 3965 - 3968, http://dx.doi.org/10.1109/EMBC.2013.6610413
,2013, 'Localized Sparse Code Gradient in Alzheimer's disease staging', in Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS, pp. 5398 - 5401, http://dx.doi.org/10.1109/EMBC.2013.6610769
,2013, 'Overlapping node discovery for improving classification of lung nodules', in Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS, pp. 5461 - 5464, http://dx.doi.org/10.1109/EMBC.2013.6610785
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